RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 ITM2CQ9NQX7 267 aa13.4□□□□□ -0.26
VGLL3-202ENST00000398399 C13orf42A0A1B0GVH6 325 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 DNAJB6O75190 326 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 CYCSP99999 105 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 HNRNPA0Q13151 305 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 HSDL1Q3SXM5 330 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 MSANTD2Q6P1R3 559 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 C12orf40Q86WS4 652 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TBC1D3BA6NDS4 549 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 SSX5O60225 188 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 CYP2B6P20813 491 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 COMMD7Q86VX2 200 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 C12orf29Q8N999 325 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ABCG8Q9H221 673 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 MAFFQ9ULX9 164 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 STUB1Q9UNE7 303 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ACTBP60709 375 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ACTG1P63261 375 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 DUSP4Q13115 394 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 GNG8Q9UK08 70 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 RAI2Q9Y5P3 530 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 PIRTP0C851 137 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 CDH11P55287 796 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 BRINP2Q9C0B6 783 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 EIF5A2Q9GZV4 153 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 AVPR1BP47901 424 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ENTPD1P49961 510 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 LRRC66Q68CR7 880 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 EPYCQ99645 322 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TRIM64BA6NI03 449 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ZNF157P51786 506 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 EIF2B4Q9UI10 523 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ZNF670-ZNF695F2Z2N8 137 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 RGS9O75916 674 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TGM6O95932 706 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 EDNRAP25101 427 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TMEM69Q5SWH9 247 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 CELF3Q5SZQ8 465 aaKnown RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 SLC16A9Q7RTY1 509 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 MATN3O15232 486 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ZBTB45Q96K62 511 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 GFOD1Q9NXC2 390 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 ACSL5Q9ULC5 683 aa13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
VGLL3-202ENST00000398399 TPST2O60704 377 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 PPP5CP53041 499 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 HERV-K104P61576 105 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 TLE3Q04726 772 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 ZNF675Q8TD23 568 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 HSH2DQ96JZ2 352 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 FER1L5A0AVI2 2057 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 LRRC37A3O60309 1634 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 TSPAN1O60635 241 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 RHOQP17081 205 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 BMP8BP34820 402 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 MAP2K3P46734 347 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 GPAT4Q86UL3 456 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 PKP2Q99959 881 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 TMEM185BQ9H7F4 350 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 PHPT1Q9NRX4 125 aaPredicted RBP13.38□□□□□ -0.27
VGLL3-202ENST00000398399 FAM120CQ9NX05 1096 aaKnown RBP13.38□□□□□ -0.27
VGLL3-202ENST00000398399 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 DNASE1P24855 282 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
VGLL3-202ENST00000398399 YBEYP58557 167 aaPredicted RBP13.38□□□□□ -0.27
VGLL3-202ENST00000398399 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 CLEC12AQ5QGZ9 265 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 ARL9Q6T311 187 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 OR56A1Q8NGH5 318 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 RGMAQ96B86 450 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 INMT-MINDY4F8WBC2 141 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 CILPO75339 1184 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 MAFO75444 373 aaPredicted RBP13.38□□□□□ -0.27
VGLL3-202ENST00000398399 CD79BP40259 229 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 SLC6A9P48067 706 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 DNAJB13P59910 316 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 MAXP61244 160 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 ABRAXAS2Q15018 415 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 OR8J3Q8NGG0 315 aa13.38□□□□□ -0.27
VGLL3-202ENST00000398399 SLC45A3Q96JT2 553 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms