RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TP53BP2Q13625 1128 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SMAD2Q15796 467 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 HIKESHIQ53FT3 197 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 FASTKD1Q53R41 847 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 BEX5Q5H9J7 111 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 NOMO2Q5JPE7 1267 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 NPNTQ6UXI9 565 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 BHLHA15Q7RTS1 189 aaPredicted RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 RNF149Q8NC42 400 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 OR6Y1Q8NGX8 325 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 PGAP3Q96FM1 320 aaPredicted RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 PANX3Q96QZ0 392 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 KCNK16Q96T55 309 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SMOQ99835 787 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF416Q9BWM5 594 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SDCBP2Q9H190 292 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 OR51M1Q9H341 326 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 UBP1Q9NZI7 540 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 COPS3Q9UNS2 423 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SRPK3Q9UPE1 567 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ASB4Q9Y574 426 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 URADA6NGE7 173 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 HS6ST1O60243 411 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 AVILO75366 819 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 TRMUO75648 421 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 DKK1O94907 266 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 AK1P00568 194 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ERBB2P04626 1255 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 IFNA6P05013 189 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINE1P05121 402 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SMIM6P0DI80 62 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 JUPP14923 745 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 OR1E1P30953 314 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 BACE1P56817 501 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 INAVAQ3KP66 663 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 DDI2Q5TDH0 399 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SH2D5Q6ZV89 423 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 BIVMQ86UB2 503 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ANKRD46Q86W74 232 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 OR2T34Q8NGX1 318 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 RXFP2Q8WXD0 754 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 TMEM176AQ96HP8 235 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 SERPINI1Q99574 410 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 ZBTB18Q99592 522 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 EBNA1BP2Q99848 306 aaKnown RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 NLNQ9BYT8 704 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 PPA2Q9H2U2 334 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 GSX1Q9H4S2 264 aaPredicted RBP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 POPDC2Q9HBU9 364 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 TMPRSS11EQ9UL52 423 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 PDE4DIPQ5VU43 2346 aa6.4□□□□□ -1.39
TM9SF4-202ENST00000398022 LCTP09848 1927 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM92AA1XBS5 289 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 WASHC1A8K0Z3 465 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 WASH3PC4AMC7 463 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ADAM20O43506 726 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 SGCEO43556 437 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ZNF821O75541 412 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 VNN2O95498 520 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CDK1P06493 297 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 RBP1P09455 135 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CBSLP0DN79 551 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 AKR1A1P14550 325 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TPSB2P20231 275 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ICAM3P32942 547 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CBSP35520 551 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 CEBPGP53567 150 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 RPL26P61254 145 aaKnown RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 OSTNP61366 133 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 DEFA6Q01524 100 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 MMRN1Q13201 1228 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TRAM2Q15035 370 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 TPSAB1Q15661 275 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ZIK1Q3SY52 487 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 OR5M10Q6IEU7 315 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 AFTPHQ6ULP2 937 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 WASH2PQ6VEQ5 465 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 UBE2J2Q8N2K1 259 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 DNERQ8NFT8 737 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 MAFIPQ8WZ33 124 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 APOL2Q9BQE5 337 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 ITPAQ9BY32 194 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 SLC5A7Q9GZV3 580 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 SLA2Q9H6Q3 261 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 USP29Q9HBJ7 922 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 PRDM8Q9NQV8 689 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 KLHL28Q9NXS3 571 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 E5RJQ4 531 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FFAR2O15552 330 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 SPINT1O43278 529 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 FKTNO75072 461 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 SNNO75324 88 aaPredicted RBP6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 OR8G3PP0DMU2 310 aa6.39□□□□□ -1.39
TM9SF4-202ENST00000398022 HNRNPA2B1P22626 353 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms