RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 DIO3P55073 304 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 MAZP56270 477 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 MEF2AQ02078 507 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 MAD2L1Q13257 205 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 IMPG1Q17R60 797 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 DEFB133Q30KQ1 61 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 C6orf132Q5T0Z8 1188 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 VN1R5Q7Z5H4 357 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 PARP9Q8IXQ6 854 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 FNDC5Q8NAU1 212 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 C11orf24Q96F05 449 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 FCRL1Q96LA6 429 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 PRAP1Q96NZ9 151 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 TAGLN3Q9UI15 199 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 ASXL3Q9C0F0 2248 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 RP1P56715 2156 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 CROCCQ5TZA2 2017 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 TRBC2A0A5B9 178 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 OR6C74A6NCV1 312 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 MAGEB17A8MXT2 336 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 ISM1B1AKI9 464 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 PPM1DO15297 605 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 TNFSF14O43557 240 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 PCSK2P16519 638 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 EPHA8P29322 1005 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 NCALDP61601 193 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 BNIP3Q12983 259 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 SF1Q15637 639 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 C14orf28Q4W4Y0 310 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 PDCD4Q53EL6 469 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 KIAA1614Q5VZ46 1190 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 RNF175Q8N4F7 328 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 CMTM5Q96DZ9 223 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 DMRT3Q9NQL9 472 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 ACTR10Q9NZ32 417 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 NOP53Q9NZM5 478 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 VPS29Q9UBQ0 182 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 SNX7Q9UNH6 387 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 TMED5Q9Y3A6 229 aa18.71■□□□□ 0.59
PDLIM2-205ENST00000397761 OR5K3A6NET4 321 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 PSMD12O00232 456 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 YKT6O15498 198 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 PCNAP12004 261 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 UGT2B7P16662 529 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 SCTRP47872 440 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 STX1BP61266 288 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 RPL38P63173 70 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC5A12Q1EHB4 618 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC23A3Q6PIS1 610 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 MIER2Q8N344 545 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 ANKRD53Q8N9V6 530 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC7A6OSQ96CW6 309 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 DPH7Q9BTV6 452 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 C1orf50Q9BV19 199 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 SIRT5Q9NXA8 310 aa18.7■□□□□ 0.58
PDLIM2-205ENST00000397761 UNC13CQ8NB66 2214 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 C2orf74A8MZ97 194 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ANKRD28O15084 1053 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 GALR2O43603 387 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 SEC22BO75396 215 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ETHE1O95571 254 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 TBX6O95947 436 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ESRRAP11474 423 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 COX4I1P13073 169 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 CD1EP15812 388 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 AMD1P17707 334 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 POLR2CP19387 275 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 GSTM2P28161 218 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 GRIA3P42263 894 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 RPS13P62277 151 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 RELAQ04206 551 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 DDX39BQ13838 428 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 HLA-BQ31612 363 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 PAQR7Q86WK9 346 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 FUNDC1Q8IVP5 155 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 KYQ8NBH2 561 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 RP9Q8TA86 221 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 TBC1D10AQ9BXI6 508 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ZIM2Q9NZV7 527 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 ANKMY1Q9P2S6 941 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 DNAH14Q0VDD8 3507 aa18.69■□□□□ 0.58
PDLIM2-205ENST00000397761 OR2A25A4D2G3 310 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 THRAP10827 490 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 PHEXP78562 749 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 TBL3Q12788 808 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 CUL3Q13618 768 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 IL23RQ5VWK5 629 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 SPESP1Q6UW49 350 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 ASRGL1Q7L266 308 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 ZNF438Q7Z4V0 828 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 OOSP2Q86WS3 158 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 FAM20CQ8IXL6 584 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 ARL10Q8N8L6 244 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 TTLQ8NG68 377 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 SAP25Q8TEE9 199 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 CHTF18Q8WVB6 975 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms