RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CLDN9O95484 217 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 CHEK2O96017 543 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 SLC19A1P41440 591 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 RBBP5Q15291 538 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 C11orf91Q3C1V1 193 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 PRAMEF14Q5SWL7 426 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 PAOXQ6QHF9 649 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 ALDH16A1Q8IZ83 802 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 RNF148Q8N7C7 305 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 OR52E1Q8NGJ3 308 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 ZUFSPQ96AP4 578 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 DGCR14Q96DF8 476 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 TRPS1Q9UHF7 1281 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 KCNE2Q9Y6J6 123 aa18.64■□□□□ 0.57
PDLIM2-204ENST00000397760 A0A1B0GTW7 788 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 A0A1B0GVT2 93 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 GNSP15586 552 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 NPPBP16860 134 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 ZNF26P17031 533 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 GPX3P22352 226 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 GRIK2Q13002 908 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 ELOCQ15369 112 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 CEP68Q76N32 757 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 EFL1Q7Z2Z2 1120 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 LMX1AQ8TE12 382 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 NELL1Q92832 810 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 ZNF597Q96LX8 424 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 XKR8Q9H6D3 395 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 KIR3DX1Q9H7L2 352 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 CLGNO14967 610 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 PIP5K1BO14986 540 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 KDM1AO60341 852 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 CLPTM1O96005 669 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 FAM58BPP0C7Q3 252 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 HMOX2P30519 316 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 MSX2P35548 267 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 RAB28P51157 221 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 CHIT1Q13231 466 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 DDIASQ8IXT1 998 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 FAM46DQ8NEK8 389 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 SETD7Q8WTS6 366 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 SMPDL3AQ92484 453 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 OSBPL11Q9BXB4 747 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 RAB11FIP5Q9BXF6 653 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 TUBB1Q9H4B7 451 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 TMEM74BQ9NUR3 256 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 ARMC1Q9NVT9 282 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 UBAP1Q9NZ09 502 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 GPRC5BQ9NZH0 403 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 SPASTQ9UBP0 616 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 BTRCQ9Y297 605 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 DYRK1BQ9Y463 629 aa18.63■□□□□ 0.57
PDLIM2-204ENST00000397760 LRP4O75096 1905 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 NCOR1O75376 2440 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PRORSD1PA6NEY8 169 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 OR5K4A6NMS3 321 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 E7EQ34 232 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PRAMEF4O60810 478 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PKLRP30613 574 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 CNR2P34972 360 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 HNRNPKP61978 463 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 TXNL4AP83876 142 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 IRF8Q02556 426 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 FOXM1Q08050 763 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 IL23RQ5VWK5 629 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PRAMEF9Q5VWM5 478 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 TRIM48Q8IWZ4 208 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 CHCHD4Q8N4Q1 142 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 MINDY1Q8N5J2 469 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 L3MBTL4Q8NA19 623 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PATE1Q8WXA2 126 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 EME1Q96AY2 570 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 SH3KBP1Q96B97 665 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 GPATCH1Q9BRR8 931 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 TRIM15Q9C019 465 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 TMEM45AQ9NWC5 275 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 ZSCAN32Q9NX65 697 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 ABCD2Q9UBJ2 740 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 PTGDR2Q9Y5Y4 395 aa18.62■□□□□ 0.57
PDLIM2-204ENST00000397760 KIR2DS5A0A0G2JLQ3 304 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 A0A0G2JNG1 304 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 KIR2DS3K7RE56 304 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 FFAR3O14843 346 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 GPR42O15529 346 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 LINC00032P0C843 101 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 SLC2A4P14672 509 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 PCDH1Q08174 1060 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 LSAMPQ13449 338 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 KIR2DS5Q14953 304 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 CPSF6Q16630 551 aaKnown RBP eCLIP18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 ZNF528Q3MIS6 628 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 GGTA1PQ4G0N0 100 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 XKR6Q5GH73 641 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 PRAMEF13Q5VWM6 474 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 LIPJQ5W064 366 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 BORAQ6PGQ7 559 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 SCIMPQ6UWF3 145 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 GKN2Q86XP6 184 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 NAGSQ8N159 534 aa18.61■□□□□ 0.57
PDLIM2-204ENST00000397760 LINC01555Q8NAE3 123 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms