RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 LCN10Q6JVE6 187 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 CNPY4Q8N129 248 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 NEIL2Q969S2 332 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 DHRS4Q9BTZ2 278 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 CAPS2Q9BXY5 557 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 DNAJC11Q9NVH1 559 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 PSMC3IPQ9P2W1 217 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 FETUBQ9UGM5 382 aa24.23■■□□□ 1.47
TSPAN4-207ENST00000397411 A0A1B0GX78 115 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 FITM1A5D6W6 292 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 UBXN8O00124 270 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 CLGNO14967 610 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 NKX2-8O15522 239 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 TAPBPO15533 448 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 OR1F1O43749 312 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 CCNT2O60583 730 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 MUM1Q2TAK8 710 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 NKAIN1Q4KMZ8 207 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 FBXO48Q5FWF7 155 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 WDR93Q6P2C0 686 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 TMPRSS11BQ86T26 416 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 ABHD11Q8NFV4 315 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 RHEBL1Q8TAI7 183 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 GBP5Q96PP8 586 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 EPB41L4BQ9H329 900 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 TBK1Q9UHD2 729 aa24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 PTBP2Q9UKA9 531 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-207ENST00000397411 CREG1O75629 220 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 CD63P08962 238 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 RBP1P09455 135 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 RAB40ALP0C0E4 278 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 COL6A2P12110 1019 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 GFAPP14136 432 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 GNAZP19086 355 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 GCAP28676 217 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 GGT5P36269 586 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 SLC6A12P48065 614 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 CSRP3P50461 194 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 CYP4F2P78329 520 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 MEF2AQ02078 507 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ERV3-1Q14264 604 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 SLC9A5Q14940 896 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 NDUFA9Q16795 377 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 TSNAXIP1Q2TAA8 658 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 NXPE4Q6UWF7 544 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ZNF517Q6ZMY9 492 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ENDOVQ8N8Q3 282 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 PDPRQ8NCN5 879 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 SNRNP27Q8WVK2 155 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ISL2Q96A47 359 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ESAMQ96AP7 390 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ATOH8Q96SQ7 321 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 RUFY1Q96T51 708 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 AIF1LQ9BQI0 150 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 ACTL8Q9H568 366 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 PELI2Q9HAT8 420 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 CPSF2Q9P2I0 782 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 CDC14AQ9UNH5 594 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 RUVBL1Q9Y265 456 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 PCDHGA6Q9Y5G7 932 aa24.21■■□□□ 1.47
TSPAN4-207ENST00000397411 KCNE1BA0A087WTH5 132 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 STATHP02808 62 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 MAGEA12P43365 314 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 CDC16Q13042 620 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 HKDC1Q2TB90 917 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 PRTGQ2VWP7 1150 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 KLHDC8AQ8IYD2 350 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 PLD6Q8N2A8 252 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 METTL27Q8N6F8 245 aaPredicted RBP24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 MFSD9Q8NBP5 474 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 CAMKVQ8NCB2 501 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 OR4K1Q8NGD4 311 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 COL26A1Q96A83 441 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 TMEM79Q9BSE2 394 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 PARD6BQ9BYG5 372 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 CD244Q9BZW8 370 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 FAM117AQ9C073 453 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 PRM3Q9NNZ6 103 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 PADI2Q9Y2J8 665 aa24.2■■□□□ 1.46
TSPAN4-207ENST00000397411 TRBC2A0A5B9 178 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 SMIM23A6NLE4 172 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 TERTO14746 1132 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 LCMT2O60294 686 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 SHBGP04278 402 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 SERPIND1P05546 499 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 C1GALT1C1LP0DN25 315 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 CXCR2P25025 360 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 HSD17B3P37058 310 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 BCL6P41182 706 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 EMP3P54852 163 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 RPS18P62269 152 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 RHDQ02161 417 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 NCF4Q15080 339 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 RBBP5Q15291 538 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 GARNL3Q5VVW2 1013 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ZNF385CQ66K41 422 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 EMBQ6PCB8 327 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 TIFABQ6ZNK6 161 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ASPGQ86U10 573 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 SLC13A3Q8WWT9 602 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms