RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RHPN2P1A8MT19 583 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 H0YIV9 168 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 MANBAO00462 879 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 TNFSF14O43557 240 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 UBXN7O94888 489 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CCNDBP1O95273 360 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 GLB1P16278 677 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 UGT2B7P16662 529 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 BIRC2Q13490 618 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 TUBB3Q13509 450 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SLBPQ14493 270 aaKnown RBP eCLIP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 NR1D2Q14995 579 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SF1Q15637 639 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 TMPRSS7Q7RTY8 843 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 HOMEZQ8IX15 550 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 FAM20CQ8IXL6 584 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CACNA2D3Q8IZS8 1091 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 ANKS4BQ8N8V4 417 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 FAM181AQ8N9Y4 354 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 CCDC197Q8NCU1 140 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 C19orf60Q96EN9 201 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 PPP1R36Q96LQ0 422 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 C3orf30Q96M34 536 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 SLC38A3Q99624 504 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 MRPS30Q9NP92 439 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 FARSBQ9NSD9 589 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 HRASLS2Q9NWW9 162 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 LRIT1Q9P2V4 623 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 APOBEC2Q9Y235 224 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 U3KQA8 63 aa16.28■□□□□ 0.2
TSPAN4-205ENST00000397406 GSAPA4D1B5 854 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 C2orf74A8MZ97 194 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 SIGLEC6O43699 453 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 DIAPH2O60879 1101 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 KRT6AP02538 564 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 KRT6BP04259 564 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 MYF5P13349 255 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 TYRP1P17643 537 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 EPHA3P29320 983 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 CMPK1P30085 196 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 KRT6CP48668 564 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 EPHA4P54764 986 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 MEF2AQ02078 507 aaPredicted RBP16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 CAMK2BQ13554 666 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 LAPTM5Q13571 262 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 ABRAXAS2Q15018 415 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 XKR7Q5GH72 579 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 KIAA1614Q5VZ46 1190 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 SCIMPQ6UWF3 145 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 DDIASQ8IXT1 998 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 WDR20Q8TBZ3 569 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 APOLD1Q96LR9 279 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 OR52B2Q96RD2 323 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 ZNF490Q9ULM2 529 aaPredicted RBP16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 PADI4Q9UM07 663 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 SNX6Q9UNH7 406 aa16.27■□□□□ 0.19
TSPAN4-205ENST00000397406 CELSR3Q9NYQ7 3312 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 COL5A1P20908 1838 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 GOLGA8QA0A0J9YX86 632 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 SERTM1A2A2V5 107 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 FAM149AA5PLN7 773 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 GOLGA8OA6NCC3 632 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 GOLGA8NF8WBI6 632 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 H7BY64 318 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 ULK1O75385 1050 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 PDYNP01213 254 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 LINC00032P0C843 101 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 CAPZBP47756 277 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 CCR8P51685 355 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 PPP1CAP62136 330 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 CSNK1G2P78368 415 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 REEP5Q00765 189 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 SLC5A12Q1EHB4 618 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 PAGE2BQ5JRK9 111 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 FRG2Q64ET8 278 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 ZNF425Q6IV72 752 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 MED27Q6P2C8 311 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 SPESP1Q6UW49 350 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 LAS2Q8IYD9 372 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 EID2Q8N6I1 236 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 ZNF740Q8NDX6 193 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 ZCCHC14Q8WYQ9 949 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 PRAP1Q96NZ9 151 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 FRG2BQ96QU4 278 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 CCT7Q99832 543 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 DPH7Q9BTV6 452 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 TMEM184CQ9NVA4 438 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 CCL27Q9Y4X3 112 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 PCDHGA11Q9Y5H2 935 aa16.26■□□□□ 0.19
TSPAN4-205ENST00000397406 RP1P56715 2156 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 LAMA5O15230 3695 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 ATP6AP2A0A1C7CYW4 349 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 ATP6AP2O75787 350 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 FKBP9O95302 570 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 AMD1P17707 334 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 HRH2P25021 359 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 GRIA3P42263 894 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms