RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 A0A1W2PQ45 241 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 A0A1W2PQY0 241 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 EFCAB9A8MZ26 197 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 GFYI3L273 518 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PRMT3O60678 531 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 CNOT3O75175 753 aaKnown RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 IGSF6O95976 241 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 NUDT7P0C024 238 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 HIST1H2AGP0C0S8 130 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 COX7A2P14406 83 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 HIST1H2ADP20671 130 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 SERPINA4P29622 427 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 LIPAP38571 399 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PPP3CCP48454 512 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PFN3P60673 137 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 CHIT1Q13231 466 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 VEZF1Q14119 521 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 TAF12Q16514 161 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PRSS36Q5K4E3 855 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PAGE2Q7Z2X7 111 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 KIAA1958Q8N8K9 716 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 RHOXF1Q8NHV9 184 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 HIST1H2AHQ96KK5 128 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 EPYCQ99645 322 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 HIST1H2AJQ99878 128 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 H2AFJQ9BTM1 129 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 POLE4Q9NR33 117 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 RNF6Q9Y252 685 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 CPSF4O95639 269 aaKnown RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 CD40LGP29965 261 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 SF1Q15637 639 aaKnown RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 TPRG1Q6ZUI0 275 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 NEK10Q6ZWH5 1172 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 FAM124AQ86V42 546 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 SCRN2Q96FV2 425 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 TPD52L3Q96J77 140 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ITPAQ9BY32 194 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ZBTB20Q9HC78 741 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 OR56A5P0C7T3 313 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 LAMP1P11279 417 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 EIF2DP41214 584 aaKnown RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 C21orf58P58505 322 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 LMAN2Q12907 356 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 Q6ZPB1 254 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 TSEN54Q7Z6J9 526 aaKnown RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 WDR20Q8TBZ3 569 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ZHX1-C8orf76Q96EF9 292 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 C11orf24Q96F05 449 aaPredicted RBP15.19■□□□□ 0.02
HOXA3-202ENST00000396352 HEPHQ9BQS7 1158 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 ATG10Q9H0Y0 220 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 VPS4AQ9UN37 437 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 PCDHB11Q9Y5F2 797 aa15.19■□□□□ 0.02
HOXA3-202ENST00000396352 MPC1LP0DKB6 136 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 PPP5CP53041 499 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 CSTF3Q12996 717 aaKnown RBP15.18■□□□□ 0.02
HOXA3-202ENST00000396352 GPR162Q16538 588 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SLC22A16Q86VW1 577 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 PLD3Q8IV08 490 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 OR2AP1Q8NGE2 309 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SLC38A4Q969I6 547 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SH3KBP1Q96B97 665 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 TPT1P8Q9HAU6 139 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SACM1LQ9NTJ5 587 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.18■□□□□ 0.02
HOXA3-202ENST00000396352 C1orf226A1L170 272 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ZBBXA8MT70 800 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 M0R082 166 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 CD70P32970 193 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SP140Q13342 867 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 MAPK11Q15759 364 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SERPINA13PQ6UXR4 307 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ECHDC3Q96DC8 303 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ASIC4Q96FT7 647 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 BBS2Q9BXC9 721 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 DCSTAMPQ9H295 470 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ABCB8Q9NUT2 735 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 TMEM184CQ9NVA4 438 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SPATA6Q9NWH7 488 aaPredicted RBP15.18■□□□□ 0.02
HOXA3-202ENST00000396352 RNF186Q9NXI6 227 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SCN5AQ14524 2016 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 NTRK1P04629 796 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SYT16Q17RD7 645 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 GPR153Q6NV75 609 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SLC35B4Q969S0 331 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ANKHQ9HCJ1 492 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 ZNF334Q9HCZ1 680 aaPredicted RBP15.18■□□□□ 0.02
HOXA3-202ENST00000396352 VPS29Q9UBQ0 182 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 SLCO3A1Q9UIG8 710 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 PPIL1Q9Y3C6 166 aa15.18■□□□□ 0.02
HOXA3-202ENST00000396352 GCM2O75603 506 aaPredicted RBP15.17■□□□□ 0.02
HOXA3-202ENST00000396352 VIPP01282 170 aa15.17■□□□□ 0.02
HOXA3-202ENST00000396352 C21orf33P30042 268 aaPredicted RBP15.17■□□□□ 0.02
HOXA3-202ENST00000396352 RRM2P31350 389 aa15.17■□□□□ 0.02
HOXA3-202ENST00000396352 CTSOP43234 321 aaPredicted RBP15.17■□□□□ 0.02
HOXA3-202ENST00000396352 ALDH7A1P49419 539 aaKnown RBP15.17■□□□□ 0.02
HOXA3-202ENST00000396352 STK19P49842 368 aaPredicted RBP15.17■□□□□ 0.02
HOXA3-202ENST00000396352 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms