RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CHCHD4Q8N4Q1 142 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 CELF2-AS1Q8N7Q2 184 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 C2orf15Q8WU43 125 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 USP7Q93009 1102 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 VMP1Q96GC9 406 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 EBPLQ9BY08 206 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 ZBTB20Q9HC78 741 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 NECTIN3Q9NQS3 549 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 PRUNE2Q8WUY3 3088 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 GLYATL1P3A0A0U1RQE8 302 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 GAPDHSO14556 408 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 FGBP02675 491 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 EFNA1P20827 205 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 GZMMP51124 257 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 ERVFC1P60507 584 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 LRIF1Q5T3J3 769 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 GPRC6AQ5T6X5 926 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 STEAP3Q658P3 488 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 ZNF621Q6ZSS3 439 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 ZNF551Q7Z340 670 aaPredicted RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 UBE2Q1Q7Z7E8 422 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 ZNF566Q969W8 418 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 PANX1Q96RD7 426 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 DSN1Q9H410 356 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 KRT84Q9NSB2 600 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 PPT2Q9UMR5 302 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 VPS4AQ9UN37 437 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 CHD5Q8TDI0 1954 aa13.61□□□□□ -0.23
CCHCR1-203ENST00000396268 LOC100506127A0A0U1RQW1 187 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 HIDE1A8MVS5 230 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 M0QX08 132 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 WNT9AO14904 365 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TGM5O43548 720 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 BNIP3LO60238 219 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 FZD6O60353 706 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 FABP3P05413 133 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 ACRV1P26436 265 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 CLK1P49759 484 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 VLDLRP98155 873 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TTLL9Q3SXZ7 439 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TXNDC8Q6A555 127 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TMC5Q6UXY8 1006 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 RNF175Q8N4F7 328 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 PIH1D2Q8WWB5 315 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 ATL1Q8WXF7 558 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 ZHX1-C8orf76Q96EF9 292 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 APIPQ96GX9 242 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 ZNF486Q96H40 463 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 DPH2Q9BQC3 489 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 REXO4Q9GZR2 422 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 DUSP21Q9H596 190 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 NEK6Q9HC98 313 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 PCDHGB1Q9Y5G3 927 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 PIKFYVEQ9Y2I7 2098 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TTC34A8MYJ7 566 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 LILRB3O75022 631 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 CPSF4O95639 269 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 BPIP17213 487 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 SDC1P18827 310 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 HSPA14Q0VDF9 509 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 RAB33AQ14088 237 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 GBX1Q14549 363 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 LGALS12Q96DT0 336 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 TPD52L3Q96J77 140 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 IL1RAPQ9NPH3 570 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 INSL5Q9Y5Q6 135 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 ANAPC1Q9H1A4 1944 aa13.6□□□□□ -0.23
CCHCR1-203ENST00000396268 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 RFPL2O75678 378 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CD36P16671 472 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CSKP41240 450 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 KIR3DL1P43629 444 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 BCL2L1Q07817 233 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 MADCAM1Q13477 382 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 CDH18Q13634 790 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 GALNT13Q8IUC8 556 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 DNAJB8Q8NHS0 232 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 ZNF300Q96RE9 604 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 SLC32A1Q9H598 525 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 TM9SF3Q9HD45 589 aa13.59□□□□□ -0.23
CCHCR1-203ENST00000396268 ACOT13Q9NPJ3 140 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms