RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ANKDD1BA6NHY2 528 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 LILRA5A6NI73 299 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 RHPN2P1A8MT19 583 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 PRR33A8MZF0 331 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 FOXE1O00358 373 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 UBXN7O94888 489 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 GIMD1P0DJR0 217 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TYRP1P17643 537 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 AMD1P17707 334 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 PIK3CBP42338 1070 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 NUBP1P53384 320 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 DIO3P55073 304 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 SPRED3Q2MJR0 410 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 LACTB2Q53H82 288 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 KLHL35Q6PF15 583 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 ZFAND4Q86XD8 727 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 CMTM7Q96FZ5 175 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 IL21RQ9HBE5 538 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 DMRT3Q9NQL9 472 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TXLNGQ9NUQ3 528 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 AIG1Q9NVV5 245 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 NLGN3Q9NZ94 848 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 NOP53Q9NZM5 478 aaKnown RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 VPS29Q9UBQ0 182 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 ADGRE2Q9UHX3 823 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TRBC2A0A5B9 178 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 NPIPB8E9PQR5 432 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 OR1F1O43749 312 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 CER1O95813 267 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 SYPP08247 313 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 PIK3R1P27986 724 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 IRX1P78414 480 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 SPESP1Q6UW49 350 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TBC1D19Q8N5T2 526 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 SAP25Q8TEE9 199 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 RSC1A1Q92681 617 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 LOXL4Q96JB6 756 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 DUSP23Q9BVJ7 150 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 RHBGQ9H310 441 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TAGLN3Q9UI15 199 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 RAB23Q9ULC3 237 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 EIF3LQ9Y262 564 aaKnown RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 KLHL20Q9Y2M5 609 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 POLR3HQ9Y535 204 aaPredicted RBP19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 R4GN57 208 aa19.6■□□□□ 0.73
VCPKMT-202ENST00000395860 TTC28Q96AY4 2481 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 PSMD12O00232 456 aaPredicted RBP19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ARHGAP33O14559 1287 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 SH3BGRLO75368 114 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ATP5HO75947 161 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 EPN2O95208 641 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 FKBP9O95302 570 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 T-ENOLP0DO92 83 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ALPPL2P10696 532 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ESRRAP11474 423 aaPredicted RBP19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 CALB2P22676 271 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 SERPINB1P30740 379 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 MPLP40238 635 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 GRIA3P42263 894 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 PPM1FP49593 454 aaPredicted RBP19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 CCT8P50990 548 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 NAA25Q14CX7 972 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC5A12Q1EHB4 618 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 IL23RQ5VWK5 629 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ZNF425Q6IV72 752 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 KANSL1Q7Z3B3 1105 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 TRIM73Q86UV7 250 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 PLD3Q8IV08 490 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 SLC35F3Q8IY50 421 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 MIER2Q8N344 545 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ANKRD53Q8N9V6 530 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 APIPQ96GX9 242 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 ARRDC1-AS1Q9H2J1 176 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 NMRK1Q9NWW6 199 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 LRIT1Q9P2V4 623 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 GMEB2Q9UKD1 530 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 GPR45Q9Y5Y3 372 aa19.59■□□□□ 0.73
VCPKMT-202ENST00000395860 MDC1Q14676 2089 aaKnown RBP19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 HAT1O14929 419 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 ZW10O43264 779 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 NRP2O60462 931 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 UNC5CO95185 931 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 TGFB1P01137 390 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 HNRNPH2P55795 449 aaKnown RBP19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 NME5P56597 212 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 KIAA0040Q15053 153 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 ZC3H14Q6PJT7 736 aaKnown RBP19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 CMTM5Q96DZ9 223 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 RNF215Q9Y6U7 377 aa19.58■□□□□ 0.73
VCPKMT-202ENST00000395860 DNAH14Q0VDD8 3507 aa19.58■□□□□ 0.72
VCPKMT-202ENST00000395860 LCMT2O60294 686 aaKnown RBP19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 ETHE1O95571 254 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 PROS1P07225 676 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 MAGP20916 626 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 PRDX6P30041 224 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 SCTRP47872 440 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 CYP4F2P78329 520 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 CCDC6Q16204 474 aa19.57■□□□□ 0.72
VCPKMT-202ENST00000395860 AGKQ53H12 422 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms