RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 WWOXQ9NZC7 414 aa15.83■□□□□ 0.12
CXCL1-201ENST00000395761 NUDT4Q9NZJ9 180 aa15.83■□□□□ 0.12
CXCL1-201ENST00000395761 DHCR7Q9UBM7 475 aaKnown RBP15.83■□□□□ 0.12
CXCL1-201ENST00000395761 IL17BQ9UHF5 180 aa15.83■□□□□ 0.12
CXCL1-201ENST00000395761 PTBP2Q9UKA9 531 aaKnown RBP15.83■□□□□ 0.12
CXCL1-201ENST00000395761 ASB1Q9Y576 335 aa15.83■□□□□ 0.12
CXCL1-201ENST00000395761 AP1M2Q9Y6Q5 423 aa15.83■□□□□ 0.12
CXCL1-201ENST00000395761 KMT2BQ9UMN6 2715 aaPredicted RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 FEZF1A0PJY2 475 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 GOLGA6L10A6NI86 522 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 MEN1O00255 615 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 TERTO14746 1132 aaKnown RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 LCMT2O60294 686 aaKnown RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 MED26O95402 600 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 STATHP02808 62 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 S100BP04271 92 aaPredicted RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 KRT15P19012 456 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 HSPA7P48741 367 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 AGTR2P50052 363 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 RELAQ04206 551 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 TCTE1Q5JU00 501 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 ZNF385CQ66K41 422 aaPredicted RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 KLC3Q6P597 504 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 ZNF517Q6ZMY9 492 aaPredicted RBP15.82■□□□□ 0.12
CXCL1-201ENST00000395761 TRABD2AQ86V40 505 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 KLHDC8AQ8IYD2 350 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 TCAIMQ8N3R3 496 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 DTWD1Q8N5C7 304 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 OR4K1Q8NGD4 311 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 CT55Q8WUE5 264 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 SLC5A11Q8WWX8 675 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 MR1Q95460 341 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 CABS1Q96KC9 395 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 LRFN5Q96NI6 719 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 SLC7A5P2Q9GIP4 190 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 CHST8Q9H2A9 424 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 ENAMQ9NRM1 1142 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 CROTQ9UKG9 612 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 DYRK1BQ9Y463 629 aa15.82■□□□□ 0.12
CXCL1-201ENST00000395761 A0A1W2PPM1 405 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 FITM1A5D6W6 292 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 GOLGA8RI6L899 631 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 STK16O75716 305 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 KLK3P07288 261 aaPredicted RBP15.81■□□□□ 0.12
CXCL1-201ENST00000395761 HBQ1P09105 142 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 COL6A2P12110 1019 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 TCN2P20062 427 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 DLSTP36957 453 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 BCL6P41182 706 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 CCR8P51685 355 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 CXADRP78310 365 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 GRM7Q14831 915 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 TECRLQ5HYJ1 363 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 AGBL2Q5U5Z8 902 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 RHBDD2Q6NTF9 364 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 NXPE4Q6UWF7 544 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 CCDC81Q6ZN84 652 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 TTLL10Q6ZVT0 673 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 VN1R4Q7Z5H5 301 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 CSNK1A1LQ8N752 337 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 ZNF740Q8NDX6 193 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 MACROD1Q9BQ69 325 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 NDC1Q9BTX1 674 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 STMN4Q9H169 189 aaPredicted RBP15.81■□□□□ 0.12
CXCL1-201ENST00000395761 SPNS1Q9H2V7 528 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 GPN2Q9H9Y4 310 aaPredicted RBP15.81■□□□□ 0.12
CXCL1-201ENST00000395761 CUTCQ9NTM9 273 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 SENP1Q9P0U3 644 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 ACTL7BQ9Y614 415 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 MRPS18BQ9Y676 258 aaKnown RBP15.81■□□□□ 0.12
CXCL1-201ENST00000395761 KCNE2Q9Y6J6 123 aa15.81■□□□□ 0.12
CXCL1-201ENST00000395761 HEATR5BQ9P2D3 2071 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 HYKKA2RU49 373 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 SYCE1LA8MT33 242 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 P2RX6O15547 441 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 CAPN1P07384 714 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 ALAS2P22557 587 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 VARSP26640 1264 aaKnown RBP15.8■□□□□ 0.12
CXCL1-201ENST00000395761 UCNP55089 124 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 TMPRSS3P57727 454 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 RPS15AP62244 130 aaKnown RBP15.8■□□□□ 0.12
CXCL1-201ENST00000395761 SLC18A2Q05940 514 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 CDC16Q13042 620 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 PFKFB4Q16877 469 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 HKDC1Q2TB90 917 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 PRTGQ2VWP7 1150 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 ARHGAP40Q5TG30 622 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 SNX31Q8N9S9 440 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 TTC29Q8NA56 475 aaPredicted RBP15.8■□□□□ 0.12
CXCL1-201ENST00000395761 TLCD1Q96CP7 247 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 SCYL1Q96KG9 808 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 GBP5Q96PP8 586 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 CD244Q9BZW8 370 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 PRORYQ9H606 182 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 CNOT10Q9H9A5 744 aaKnown RBP15.8■□□□□ 0.12
CXCL1-201ENST00000395761 PELI2Q9HAT8 420 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 DNAJC11Q9NVH1 559 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 SRPK3Q9UPE1 567 aa15.8■□□□□ 0.12
CXCL1-201ENST00000395761 RUVBL1Q9Y265 456 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms