RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PNCKQ6P2M8 343 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TRAF7Q6Q0C0 670 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ZNF605Q86T29 641 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 C11orf74Q86VG3 221 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SYT12Q8IV01 421 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 BEND7Q8N7W2 519 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ASCC1Q8N9N2 400 aaKnown RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 OR6F1Q8NGZ6 308 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 COPS8Q99627 209 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CCNB1IP1Q9NPC3 277 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TAS2R9Q9NYW1 312 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ISPDA4D126 451 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SAGE2PA6NJ88 616 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ERN1O75460 977 aaKnown RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 STK16O75716 305 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 EPOP01588 193 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ESR1P03372 595 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 KIR3DL1P43629 444 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ABHD18Q0P651 414 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 ELP6Q0PNE2 266 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TUSC3Q13454 348 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SMUG1Q53HV7 270 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 NEK5Q6P3R8 708 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 GPR156Q8NFN8 814 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 GPR151Q8TDV0 419 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 FBLIM1Q8WUP2 373 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TMEM203Q969S6 136 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 DHRS1Q96LJ7 313 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 MGME1Q9BQP7 344 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 KCNH6Q9H252 994 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 RANGRFQ9HD47 186 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TRBV5-3A0A0A0MS03 114 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 YY2O15391 372 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 WDR47O94967 919 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 EPN2O95208 641 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 KCNK5O95279 499 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 GJB5O95377 273 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PTTG1O95997 202 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PTGER3P43115 390 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 RGS4P49798 205 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 DUSP4Q13115 394 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 NDUFA5Q16718 116 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CTXN3Q4LDR2 81 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 INO80DQ53TQ3 878 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CALHM3Q86XJ0 350 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TP53I13Q8NBR0 393 aaPredicted RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
CLIP2-203ENST00000395060 PSKH2Q96QS6 385 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CCM2Q9BSQ5 444 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 MAGIXQ9H6Y5 334 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 CRLS1Q9UJA2 301 aa13.86□□□□□ -0.19
CLIP2-203ENST00000395060 TNFRSF11BO00300 401 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 MTX2O75431 263 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 RGS6P49758 472 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SNRPD2P62316 118 aaKnown RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 FKBP1BP68106 108 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SPIBQ01892 262 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 UBE3AQ05086 875 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 MAD2L1Q13257 205 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 ZC3H12BQ5HYM0 836 aaKnown RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 MFSD14CQ5VZR4 134 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 ZNF517Q6ZMY9 492 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 WDR36Q8NI36 951 aaKnown RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 TP53INP1Q96A56 240 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SPASTQ9UBP0 616 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 MALT1Q9UDY8 824 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 RFXAPO00287 272 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 LRRTM2O43300 516 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 CLDN7O95471 211 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 CLDN9O95484 217 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 HTR3AP46098 478 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 BAK1Q16611 211 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 C17orf99Q6UX52 265 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 LACC1Q8IV20 430 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 LAX1Q8IWV1 398 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 LMNTD1Q8N9Z9 388 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 GLB1L3Q8NCI6 653 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SDHCQ99643 169 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 SLC22A14Q9Y267 594 aa13.85□□□□□ -0.19
CLIP2-203ENST00000395060 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
CLIP2-203ENST00000395060 IGLV3-10A0A075B6K4 115 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 H3BQ06 376 aaPredicted RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 KRT6AP02538 564 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 KRT6BP04259 564 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 LAMP1P11279 417 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 PTPN6P29350 595 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 WEE1P30291 646 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 TNFSF8P32971 234 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 CRATP43155 626 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 KRT6CP48668 564 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
CLIP2-203ENST00000395060 GLCCI1Q86VQ1 547 aa13.84□□□□□ -0.19
CLIP2-203ENST00000395060 ZZZ3Q8IYH5 903 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms