RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 RNFT1Q5M7Z0 435 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 PTRHD1Q6GMV3 140 aaKnown RBP14.94□□□□□ -0.02
SNCA-205ENST00000394991 GALNTL5Q7Z4T8 443 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 LINC00523Q86TU6 105 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 CNGA4Q8IV77 575 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 GHDCQ8N2G8 530 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 DNAAF3Q8N9W5 541 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 CA5BP1Q8WTZ4 195 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 SKA2Q8WVK7 121 aaPredicted RBP14.94□□□□□ -0.02
SNCA-205ENST00000394991 CYTH2Q99418 400 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 VKORC1Q9BQB6 163 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 UTP23Q9BRU9 249 aaKnown RBP14.94□□□□□ -0.02
SNCA-205ENST00000394991 TMUB1Q9BVT8 246 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 KCNK13Q9HB14 408 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 MRPS30Q9NP92 439 aaKnown RBP14.94□□□□□ -0.02
SNCA-205ENST00000394991 ASB1Q9Y576 335 aa14.94□□□□□ -0.02
SNCA-205ENST00000394991 ZNF407Q9C0G0 2248 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 OR2W5A6NFC9 320 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 ZNF189O75820 626 aaPredicted RBP14.93□□□□□ -0.02
SNCA-205ENST00000394991 NEURL1O76050 574 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 ADRA1DP25100 572 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PRAMEP78395 509 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 MEP1AQ16819 746 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PRSS41Q7RTY9 318 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.93□□□□□ -0.02
SNCA-205ENST00000394991 OR9A4Q8NGU2 314 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 GSDMBQ8TAX9 411 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 METTL21AQ8WXB1 218 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PANX3Q96QZ0 392 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 NPDC1Q9NQX5 325 aaPredicted RBP14.93□□□□□ -0.02
SNCA-205ENST00000394991 CATSPERZQ9NTU4 200 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 TNFRSF10DQ9UBN6 386 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PCYOX1Q9UHG3 505 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 PPT2Q9UMR5 302 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 TCAF1Q9Y4C2 921 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 MRFAP1Q9Y605 127 aa14.93□□□□□ -0.02
SNCA-205ENST00000394991 GABRR3A8MPY1 467 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 ARHGEF33A8MVX0 844 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 TSPAN12O95859 305 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 STATHP02808 62 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 SP1P08047 785 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 CD46P15529 392 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 PPARGP37231 505 aaPredicted RBP14.92□□□□□ -0.02
SNCA-205ENST00000394991 RWDD2BP57060 319 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 TBX2Q13207 712 aaPredicted RBP14.92□□□□□ -0.02
SNCA-205ENST00000394991 FAM53BQ14153 422 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 GBX1Q14549 363 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 MINDY4Q4G0A6 757 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 AARS2Q5JTZ9 985 aaKnown RBP14.92□□□□□ -0.02
SNCA-205ENST00000394991 CTSL3PQ5NE16 218 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 OTOAQ7RTW8 1153 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 ANKRD37Q7Z713 158 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 PLD3Q8IV08 490 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 MMP21Q8N119 569 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 MARVELD2Q8N4S9 558 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 TMEM178AQ8NBL3 297 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 OR9A1PQ8NGU1 263 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 SMPDL3AQ92484 453 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 NRGNQ92686 78 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 RERGQ96A58 199 aaPredicted RBP14.92□□□□□ -0.02
SNCA-205ENST00000394991 TAC3Q9UHF0 121 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 GNPTGQ9UJJ9 305 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 PCDHA13Q9Y5I0 950 aa14.92□□□□□ -0.02
SNCA-205ENST00000394991 FLNAP21333 2647 aaKnown RBP14.92□□□□□ -0.02
SNCA-205ENST00000394991 PRRG2O14669 202 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 HAT1O14929 419 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 SUN1O94901 812 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 MATN4O95460 622 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 CYC1P08574 325 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 CD99P14209 185 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 PTGER1P34995 402 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 RPA3P35244 121 aaPredicted RBP14.91□□□□□ -0.02
SNCA-205ENST00000394991 TSTA3Q13630 321 aaPredicted RBP14.91□□□□□ -0.02
SNCA-205ENST00000394991 MFSD4BQ5TF39 518 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 ZNF468Q5VIY5 522 aaPredicted RBP14.91□□□□□ -0.02
SNCA-205ENST00000394991 ICE2Q659A1 982 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 MAGEC3Q8TD91 643 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 FOPNLQ96NB1 174 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 ETNK1Q9HBU6 452 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 HCN3Q9P1Z3 774 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 C19orf25Q9UFG5 118 aaPredicted RBP14.91□□□□□ -0.02
SNCA-205ENST00000394991 HRH3Q9Y5N1 445 aa14.91□□□□□ -0.02
SNCA-205ENST00000394991 NKX2-6A6NCS4 301 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 SOWAHDA6NJG2 315 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 ERI2A8K979 691 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 MYO1CO00159 1063 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 CD3EAPO15446 510 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 GAS8O95995 478 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 EZRP15311 586 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 ZNF24P17028 368 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 RPS3P23396 243 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNCA-205ENST00000394991 AVPR1BP47901 424 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 TTPAP49638 278 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 ZNF75DP51815 510 aa14.9□□□□□ -0.02
SNCA-205ENST00000394991 EIF3BP55884 814 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 OC90Q02509 493 aaPredicted RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 PRDX1Q06830 199 aaKnown RBP14.9□□□□□ -0.02
SNCA-205ENST00000394991 TFF3Q07654 80 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms