RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 BRF2Q9HAW0 419 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 NPAP1Q9NZP6 1156 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 CRNNQ9UBG3 495 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 VPS29Q9UBQ0 182 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF282Q9UDV7 671 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 EVLQ9UI08 416 aaPredicted RBP9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 VPS4AQ9UN37 437 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 FCF1Q9Y324 198 aaKnown RBP9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 KLK4Q9Y5K2 254 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 PMF1-BGLAPU3KQ54 211 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 PCNTO95613 3336 aa9.73□□□□□ -0.85
UBE2D3-208ENST00000394803 SNPHO15079 494 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 IRF1P10914 325 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RPL3P39023 403 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 HNF4AP41235 474 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SGSHP51688 502 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 IFITM3Q01628 133 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ACSM2AQ08AH3 577 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RBBP4Q09028 425 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 INAVAQ3KP66 663 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TPRG1LQ5T0D9 272 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 C10orf62Q5T681 223 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ATXN7L2Q5T6C5 722 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ACSM2BQ68CK6 577 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 FAM92BQ6ZTR7 304 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TPRG1Q6ZUI0 275 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF367Q7RTV3 350 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 GPR155Q7Z3F1 870 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CAMKMTQ7Z624 323 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC30A8Q8IWU4 369 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 GALNT6Q8NCL4 622 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 EMILIN2Q9BXX0 1053 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ABCB10Q9NRK6 738 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RASSF1Q9NS23 344 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TRMT13Q9NUP7 481 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 FKBP14Q9NWM8 211 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 MARCH5Q9NX47 278 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CFL2Q9Y281 166 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 BACE2Q9Y5Z0 518 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SH3D21A4FU49 640 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TNFRSF11BO00300 401 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 WBP4O75554 376 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RFPL2O75678 378 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CLDN7O95471 211 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 DLGAP3O95886 979 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 HNF1BP35680 557 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC11A1P49279 550 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TPTEP56180 551 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CREMQ03060 361 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 MAPK11Q15759 364 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SPANXN2Q5MJ10 180 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RTP2Q5QGT7 225 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CCDC80Q76M96 950 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SLC46A3Q7Z3Q1 461 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 KRT73Q86Y46 540 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 PTOV1Q86YD1 416 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 RASAL3Q86YV0 1011 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 STX19Q8N4C7 294 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 DNAJC22Q8N4W6 341 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 SKA2Q8WVK7 121 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 ASB11Q8WXH4 323 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 LINC01599Q8WXQ3 324 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 APIPQ96GX9 242 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TPD52L3Q96J77 140 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CTRCQ99895 268 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 CCDC32Q9BV29 185 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 DUSP26Q9BV47 211 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 HERC2P3Q9BVR0 1158 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 BTBD2Q9BX70 525 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 C6orf62Q9GZU0 229 aaPredicted RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 TPT1P8Q9HAU6 139 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 IMPAD1Q9NX62 359 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 AFF4Q9UHB7 1163 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 LSM7Q9UK45 103 aaKnown RBP9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 IFT52Q9Y366 437 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 PCDHGA6Q9Y5G7 932 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 OR51B4Q9Y5P0 310 aa9.72□□□□□ -0.85
UBE2D3-208ENST00000394803 IGLV3-16A0A075B6K0 115 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 EFCAB10A6NFE3 127 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 HAT1O14929 419 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 SCAMP2O15127 329 aaKnown RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 GPR39O43194 453 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 PCDHGA12O60330 932 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 LRATO95237 230 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CPSF4O95639 269 aaKnown RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 LCKP06239 509 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 PTPN2P17706 415 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 EPORP19235 508 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 TACR1P25103 407 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 AOAHP28039 575 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 MZF1P28698 734 aaPredicted RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 ETV6P41212 452 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CSKP41240 450 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CDC42P60953 191 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 IRF8Q02556 426 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CHIT1Q13231 466 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 HKDC1Q2TB90 917 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 PTCHD3Q3KNS1 767 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms