RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MYL9P24844 172 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GSTM2P28161 218 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ERVK-21P61565 698 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 IRF8Q02556 426 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PTPRCAPQ14761 206 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SNAPC1Q16533 368 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MPP7Q5T2T1 576 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3GQ6DHY5 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NADSYN1Q6IA69 706 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3CQ6IPX1 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ARMC6Q6NXE6 501 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NCEH1Q6PIU2 408 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 UBE2R2Q712K3 238 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 RD3Q7Z3Z2 195 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TMEM25Q86YD3 366 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PHACTR4Q8IZ21 702 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D3Q8IZP1 549 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 CPXM2Q8N436 756 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LSMEM1Q8N8F7 131 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DTX3Q8N9I9 347 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 BCL7CQ8WUZ0 217 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 SMARCD2Q92925 531 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MAP6Q96JE9 813 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 AARSD1Q9BTE6 412 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 GTPBP2Q9BX10 602 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 HOXD1Q9GZZ0 328 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 RACGAP1Q9H0H5 632 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 LMAN2LQ9H0V9 348 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CRISPLD1Q9H336 500 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GPN2Q9H9Y4 310 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 NECTIN3Q9NQS3 549 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 IL37Q9NZH6 218 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NUFIP1Q9UHK0 495 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 MAGEL2Q9UJ55 1249 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 IKZF3Q9UKT9 509 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ERVW-1Q9UQF0 538 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 EDDM13A0A1B0GTR0 161 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TRIM64A6NGJ6 449 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TRIM64BA6NI03 449 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 HIDE1A8MVS5 230 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NPHS1O60500 1241 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ATG13O75143 517 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 UGT2B11O75310 529 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SNX4O95219 450 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 APOL3O95236 402 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GSRP00390 522 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 F7P08709 466 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 BMP2P12643 396 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 HMGA1P17096 107 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 IGFBP5P24593 272 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 HOXC13P31276 330 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CTSKP43235 329 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ITGA1P56199 1179 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GALEQ14376 348 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DHCR24Q15392 516 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CHRNA6Q15825 494 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 PAQR3Q6TCH7 311 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 KDELC1Q6UW63 502 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CD300LGQ6UXG3 332 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TIGD4Q8IY51 512 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CACTIN-AS1Q8N1I8 211 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SIDT2Q8NBJ9 832 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 WDR36Q8NI36 951 aaKnown RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 SPPL3Q8TCT6 385 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TMBIM1Q969X1 311 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SLC45A3Q96JT2 553 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MAGEB10Q96LZ2 347 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 CDCA3Q99618 268 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 PKMYT1Q99640 499 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MGME1Q9BQP7 344 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SLC30A2Q9BRI3 323 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 PDCD10Q9BUL8 212 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 C1QTNF1Q9BXJ1 281 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GON7Q9BXV9 100 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DPY30Q9C005 99 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SLC6A15Q9H2J7 730 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 NTN4Q9HB63 628 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CCM2LQ9NUG4 571 aaPredicted RBP5.53□□□□□ -1.52
RFFL-202ENST00000394597 OXSMQ9NWU1 459 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ELOVL2Q9NXB9 296 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ZDHHC3Q9NYG2 299 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 EDARQ9UNE0 448 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 SNX6Q9UNH7 406 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TEX51A0A1B0GUA7 166 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 WNT9AO14904 365 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ULK1O75385 1050 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 DNAJB5O75953 348 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 KDM4BO94953 1096 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 RASAL1O95294 804 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 IGLV3-25P01717 112 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 UBL4AP11441 157 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 BMP4P12644 408 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 ZNF30P17039 623 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 TNNI3P19429 210 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 IMPDH1P20839 514 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 GKP32189 559 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 VIPR1P32241 457 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 CD70P32970 193 aa5.53□□□□□ -1.52
RFFL-202ENST00000394597 MAPK9P45984 424 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms