RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SELPLGQ14242 412 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 UGT8Q16880 541 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 DPY19L1Q2PZI1 675 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 LRIF1Q5T3J3 769 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 MSANTD1Q6ZTZ1 278 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 SYT12Q8IV01 421 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 ACAT2Q9BWD1 397 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 MUC13Q9H3R2 512 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 SLC25A37Q9NYZ2 338 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 C6orf203Q9P0P8 240 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 SCHIP1Q9P0W5 487 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 RIMS3Q9UJD0 308 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 ARHGEF17Q96PE2 2063 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 PDZK1P1A8MUH7 402 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 DFNA5O60443 496 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 PSMB5P28074 263 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 PTPN6P29350 595 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 S100A3P33764 101 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 HNRNPFP52597 415 aaKnown RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 GAS6Q14393 721 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 RPE65Q16518 533 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 CMPK2Q5EBM0 449 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 PTCRAQ6ISU1 281 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 ABRAXAS1Q6UWZ7 409 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 TMIGD1Q6UXZ0 262 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 WASH2PQ6VEQ5 465 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 CYP2R1Q6VVX0 501 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 SYNPOQ8N3V7 929 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 OR4K1Q8NGD4 311 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 DNAJB8Q8NHS0 232 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 RAB11FIP5Q9BXF6 653 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 PAIP1Q9H074 479 aaKnown RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 C6orf106Q9H6K1 298 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 CUEDC1Q9NWM3 386 aaPredicted RBP14.39□□□□□ -0.11
CCT4-201ENST00000394440 HS3ST3A1Q9Y663 406 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 TRIOO75962 3097 aa14.39□□□□□ -0.11
CCT4-201ENST00000394440 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 AQP12BA6NM10 295 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 SCAMP1O15126 338 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 LRATO95237 230 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 MTHFD1P11586 935 aaKnown RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 HTR1EP28566 365 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 TIA1P31483 386 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCT4-201ENST00000394440 AKT2P31751 481 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 CCR5P51681 352 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 FZD5Q13467 585 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 SF1Q15637 639 aaKnown RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 IRAK1BP1Q5VVH5 260 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 ARMCX6Q7L4S7 300 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 ABI3BPQ7Z7G0 1075 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 AQP12AQ8IXF9 295 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 LILRA2Q8N149 483 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 KRT78Q8N1N4 520 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 RAB42Q8N4Z0 105 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 OR52E1Q8NGJ3 308 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 OR2L8Q8NGY9 312 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 SLCO4A1Q96BD0 722 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 RSRC1Q96IZ7 334 aaKnown RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 PCOLCE2Q9UKZ9 415 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 TOR1BO14657 336 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 ARPC2O15144 300 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 SCN2BO60939 215 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 MYO1DO94832 1006 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 TBX6O95947 436 aaPredicted RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 HTR1BP28222 390 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 MTPNP58546 118 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 REEP5Q00765 189 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 PLIN5Q00G26 463 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 PRKCQQ04759 706 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCT4-201ENST00000394440 DNAJC9Q8WXX5 260 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 ZNF570Q96NI8 536 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 KCTD14Q9BQ13 255 aaPredicted RBP14.38□□□□□ -0.11
CCT4-201ENST00000394440 RHBGQ9H310 441 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 SLC6A13Q9NSD5 602 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 TBC1D29Q9UFV1 150 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 ICKQ9UPZ9 632 aa14.38□□□□□ -0.11
CCT4-201ENST00000394440 A0A096LPI6 279 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 PRICKLE3O43900 615 aaPredicted RBP14.37□□□□□ -0.11
CCT4-201ENST00000394440 SH3BGRLO75368 114 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 ERN1O75460 977 aaKnown RBP14.37□□□□□ -0.11
CCT4-201ENST00000394440 EML2O95834 649 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 IL9P15248 144 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 WNT3P56703 355 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 MUM1Q2TAK8 710 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 RUNDC3AQ59EK9 446 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 KIAA0895LQ68EN5 471 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 CAMKMTQ7Z624 323 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 GPR180Q86V85 440 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 TMEM126BQ8IUX1 230 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 PGBD3Q8N328 593 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 GOLM1Q8NBJ4 401 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 OR8J2Q8NGG1 315 aa14.37□□□□□ -0.11
CCT4-201ENST00000394440 OR2A1Q8NGT9 310 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms