RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 IL1RAPQ9NPH3 570 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PAK6Q9NQU5 681 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 UCKL1Q9NWZ5 548 aa18.29■□□□□ 0.52
HOXC6-202ENST00000394331 UXTQ9UBK9 157 aaPredicted RBP18.29■□□□□ 0.52
HOXC6-202ENST00000394331 PTPRDP23468 1912 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 A0A096LPI6 279 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 LOC285095A0A1B0GVY8 99 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 IFNA16P05015 189 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 TNNI3P19429 210 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 FDXRP22570 491 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 C21orf33P30042 268 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 PXNP49023 591 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 SUOXP51687 545 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 IL10RBQ08334 325 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 PFKFB4Q16877 469 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 OR2T5Q6IEZ7 315 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 GDPD1Q8N9F7 314 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 OR2T11Q8NH01 316 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 OR2T29Q8NH02 315 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 BTN2A2Q8WVV5 523 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 GABARAPL3Q9BY60 117 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 C11orf54Q9H0W9 315 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 SPNS1Q9H2V7 528 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 NYNRINQ9P2P1 1898 aaKnown RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 SLC12A8A0AV02 714 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 ASGR1P07306 291 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 EFEMP1Q12805 493 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 GALEQ14376 348 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 TRIM60Q495X7 471 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 GLYR1Q49A26 553 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 SDHAF4Q5VUM1 108 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 CST9Q5W186 159 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF557Q8N988 423 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 DTX3Q8N9I9 347 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 ARRDC2Q8TBH0 407 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 KIAA1143Q96AT1 154 aaPredicted RBP18.28■□□□□ 0.52
HOXC6-202ENST00000394331 ERVMER34-1Q9H9K5 563 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 RGS18Q9NS28 235 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 SPASTQ9UBP0 616 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 NLRC5Q86WI3 1866 aa18.28■□□□□ 0.52
HOXC6-202ENST00000394331 EFCAB10A6NFE3 127 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 I3L521 148 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 AOC2O75106 756 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ARSDP51689 593 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 PER3P56645 1201 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 PSPHP78330 225 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 RPP38P78345 283 aaKnown RBP18.27■□□□□ 0.52
HOXC6-202ENST00000394331 CACNB2Q08289 660 aaPredicted RBP18.27■□□□□ 0.52
HOXC6-202ENST00000394331 MAB21L1Q13394 359 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 KIAA0040Q15053 153 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 CARD16Q5EG05 197 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ATG9BQ674R7 924 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ANKS6Q68DC2 871 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 FAHD1Q6P587 224 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 PLEKHM3Q6ZWE6 761 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 CEP68Q76N32 757 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 IFNL1Q8IU54 200 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ZDHHC21Q8IVQ6 265 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 C9orf62Q8N4C0 152 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 COQ8BQ96D53 544 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 RASSF1Q9NS23 344 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 MAPRE3Q9UPY8 281 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 LRRC14BA6NHZ5 514 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 TMEM189-UBE2V1I3L0A0 370 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 STX16O14662 325 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 SEPT4O43236 478 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 RAMP2O60895 175 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 HMGCLP35914 325 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 PBX3P40426 434 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 SLC19A1P41440 591 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 SMARCB1Q12824 385 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 KCNC3Q14003 757 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ZNF549Q6P9A3 640 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 PLPP6Q8IY26 295 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.27■□□□□ 0.52
HOXC6-202ENST00000394331 GPR151Q8TDV0 419 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 KLHL6Q8WZ60 621 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 ACTL8Q9H568 366 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 KRT84Q9NSB2 600 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 NOD1Q9Y239 953 aa18.27■□□□□ 0.52
HOXC6-202ENST00000394331 IQCMA0A1B0GVH7 501 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 LDB2O43679 373 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 MLYCDO95822 493 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 TSPAN12O95859 305 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ATXN1LP0C7T5 689 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 CBX5P45973 191 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ACVR1Q04771 509 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 NPRL3Q12980 569 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 OR4D1Q15615 310 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 FAM26DQ5JW98 314 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 LRRC66Q68CR7 880 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 BRAT1Q6PJG6 821 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 CALHM3Q86XJ0 350 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 BARD1Q99728 777 aaKnown RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ABCB8Q9NUT2 735 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 MARCH4Q9P2E8 410 aaPredicted RBP18.26■□□□□ 0.51
HOXC6-202ENST00000394331 ATP6V1HQ9UI12 483 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 A0A1B0GTL3 188 aa18.26■□□□□ 0.51
HOXC6-202ENST00000394331 DRGXA6NNA5 263 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms