RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 ZFPM1Q8IX07 1006 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 OR2AJ1Q8NGZ0 328 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 BRSK1Q8TDC3 778 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 GRHL3Q8TE85 626 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 TSSK6Q9BXA6 273 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 C2CD4BA6NLJ0 364 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 GLUD1P00367 558 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 BCHEP06276 602 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 NCBP2P52298 156 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYNPO-202ENST00000394243 CASP7P55210 303 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 CTBP2P56545 445 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 PMS2P3Q13401 168 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 ELP2Q6IA86 826 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 KIAA0930Q6ICG6 404 aaPredicted RBP11.54□□□□□ -0.56
SYNPO-202ENST00000394243 PAQR3Q6TCH7 311 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
SYNPO-202ENST00000394243 SLC44A3Q8N4M1 653 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
SYNPO-202ENST00000394243 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 FZD10Q9ULW2 581 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 NWD1Q149M9 1564 aa11.54□□□□□ -0.56
SYNPO-202ENST00000394243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 OR51F1A6NGY5 319 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 GPR89AB7ZAQ6 455 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ESR1P03372 595 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 GPR89BP0CG08 455 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ADORA2AP29274 412 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 RORAP35398 523 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PTGER3P43115 390 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PLA2G16P53816 162 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PNLIPRP1P54315 467 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 TARBP2Q15633 366 aaKnown RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ATP6AP1Q15904 470 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 DUOXA1Q1HG43 343 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 IL31RAQ8NI17 732 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 AUTS2Q8WXX7 1259 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PHB2Q99623 299 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 B4GALT4O60513 344 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 DNAJB5O75953 348 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 C1RP00736 705 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 SFTPBP07988 381 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 HSD3B2P26439 372 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 FGL2Q14314 439 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 INTS6LQ5JSJ4 861 aaKnown RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 FOLH1BQ9HBA9 442 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 MKKSQ9NPJ1 570 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PCDHB16Q9NRJ7 776 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 IFT52Q9Y366 437 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 GTF2F2P13984 249 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ERVK-25P63136 954 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CLCA4Q14CN2 919 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ALG10Q5BKT4 473 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PPP2R2DQ66LE6 453 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 RPS27LQ71UM5 84 aaKnown RBP11.53□□□□□ -0.56
SYNPO-202ENST00000394243 TFAP2BQ92481 460 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 MOCS1Q9NZB8 636 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CEP152O94986 1710 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CLDN11O75508 207 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 PET100P0DJ07 73 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 RHOQP17081 205 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 HSDL1Q3SXM5 330 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 HSDL2Q6YN16 418 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 RDH12Q96NR8 316 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 P2RX2Q9UBL9 471 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 LRRC72A6NJI9 287 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 F8W036 122 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 UBXN7O94888 489 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ZNF35P13682 527 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 BLOC1S1P78537 153 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 ATAT1Q5SQI0 421 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 C22orf42Q6IC83 251 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 CEP97Q8IW35 865 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
SYNPO-202ENST00000394243 A6NHS1 94 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 WASH3PC4AMC7 463 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 INSIG1O15503 277 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 FLRT2O43155 660 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 GRM5P41594 1212 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 DSG2Q14126 1118 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 SLC36A4Q6YBV0 504 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.56
SYNPO-202ENST00000394243 RAD9AQ99638 391 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 TAPBPLQ9BX59 468 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 OR51I1Q9H343 314 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 CENPMQ9NSP4 180 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 POT1Q9NUX5 634 aa11.52□□□□□ -0.56
SYNPO-202ENST00000394243 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms