RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ARHGEF7Q14155 803 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 VEPH1Q14D04 833 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ATP6AP1LQ52LC2 224 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RFTN2Q52LD8 501 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 C6orf136Q5SQH8 315 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 NCEH1Q6PIU2 408 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 TMEM150AQ86TG1 271 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 PTRH1Q86Y79 214 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FAM109AQ8N4B1 249 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 OR56A4Q8NGH8 313 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 OR10A6Q8NH74 314 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MYO19Q96H55 970 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RBM4BQ9BQ04 359 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RBM4Q9BWF3 364 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 TTLL2Q9BWV7 592 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CFAP97Q9P2B7 532 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 KCNN3Q9UGI6 736 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CRLS1Q9UJA2 301 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 C3orf18Q9UK00 162 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 GPR45Q9Y5Y3 372 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FNDC1Q4ZHG4 1894 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 COL4A4P53420 1690 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 B3GALT4O96024 378 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FGF4P08620 206 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RPS17P08708 135 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ATF4P18848 351 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CD70P32970 193 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 HNF1BP35680 557 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ATP4BP51164 291 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RPL38P63173 70 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ALDH6A1Q02252 535 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 GALNT1Q10472 559 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ACOX1Q15067 660 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 SPANXN2Q5MJ10 180 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ARMC4Q5T2S8 1044 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FAM205BPQ63HN1 556 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 PAMR1Q6UXH9 720 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 Q6ZSR9 355 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 GOLGA7Q7Z5G4 137 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 NOXA1Q86UR1 476 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 PROSER1Q86XN7 944 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 SIMC1Q8NDZ2 872 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CHAC2Q8WUX2 184 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 PCNPQ8WW12 178 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FATE1Q969F0 183 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CDADC1Q9BWV3 514 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 LRRC3Q9BY71 257 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MRPL9Q9BYD2 267 aaKnown RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 RNF208Q9H0X6 261 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MMP27Q9H306 513 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ZFYVE1Q9HBF4 777 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 IL17CQ9P0M4 197 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MBD1Q9UIS9 605 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 TPRKBQ9Y3C4 175 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 GMPPBQ9Y5P6 360 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 A0A1W2PRU2 124 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 KRT6AP02538 564 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 KRT6BP04259 564 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ACRP10323 421 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 SLC15A1P46059 708 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CLCN7P51798 805 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CRISP3P54108 245 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 DEFB103AP81534 67 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 TLE2Q04725 743 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 BCL2L1Q07817 233 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 FCHO2Q0JRZ9 810 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CHRNA6Q15825 494 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 CPSF6Q16630 551 aaKnown RBP eCLIP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 AP5B1Q2VPB7 878 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 GALNT7Q86SF2 657 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ZSWIM9Q86XI8 627 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ESX1Q8N693 406 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 IL26Q9NPH9 171 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 SLC52A3Q9NQ40 469 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 ELOVL2Q9NXB9 296 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 VNN3Q9NY84 501 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 LEF1Q9UJU2 399 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MYO9BQ13459 2157 aa9.66□□□□□ -0.86
PSEN1-204ENST00000394164 MEIOCA2RUB1 952 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 TYW5A2RUC4 315 aaKnown RBP9.65□□□□□ -0.86
PSEN1-204ENST00000394164 H3BQ06 376 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-204ENST00000394164 FFAR2O15552 330 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 DFNA5O60443 496 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 UROSP10746 265 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 GLULP15104 373 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 IGFBP5P24593 272 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 DCTP40126 519 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 NUDT6P53370 316 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 EEFSECP57772 596 aaKnown RBP9.65□□□□□ -0.86
PSEN1-204ENST00000394164 SLC35A2P78381 396 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 HSPA14Q0VDF9 509 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 GTF2H2Q13888 395 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 ARHGEF6Q15052 776 aa9.65□□□□□ -0.86
PSEN1-204ENST00000394164 SYT6Q5T7P8 510 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-204ENST00000394164 GTF2H2CQ6P1K8 395 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms