RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 SPANXN2Q5MJ10 180 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 PTERQ96BW5 349 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 S100A13Q99584 98 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 INPP5KQ9BT40 448 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 HCN3Q9P1Z3 774 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 FTSJ1Q9UET6 329 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 RSL24D1Q9UHA3 163 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 HCN2Q9UL51 889 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 SCN1AP35498 2009 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 LOC100509620A0A075B734 347 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 BLOC1S5-TXNDC5H3BN57 136 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 GABRDO14764 452 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 RB1P06400 928 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 RPS9P46781 194 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 CLK3P49761 638 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 FAM131AQ6UXB0 335 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 TICAM1Q8IUC6 712 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 TUBGCP5Q96RT8 1024 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 E7EQ34 232 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 SLC35E2BP0CK96 405 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 OGNP20774 298 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 AK4P27144 223 aaPredicted RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 CHAF1BQ13112 559 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 IMP4Q96G21 291 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 C11orf98E9PRG8 122 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 GNRH1P01148 92 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 RFTN1Q14699 578 aaPredicted RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 SWT1Q5T5J6 900 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 BHLHB9Q6PI77 547 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 CHRDL2Q6WN34 429 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 CLECL1Q8IZS7 167 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 ZFRQ96KR1 1074 aaKnown RBP8.84□□□□□ -0.99
CDH11-202ENST00000394156 OSBPL11Q9BXB4 747 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 NEK6Q9HC98 313 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 TRIM39Q9HCM9 518 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 TMEM138Q9NPI0 162 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 CORO2BQ9UQ03 480 aa8.84□□□□□ -0.99
CDH11-202ENST00000394156 DFNA5O60443 496 aa8.84□□□□□ -1
CDH11-202ENST00000394156 NADKO95544 446 aaPredicted RBP8.84□□□□□ -1
CDH11-202ENST00000394156 ITGA2P17301 1181 aa8.84□□□□□ -1
CDH11-202ENST00000394156 HOXB8P17481 243 aaPredicted RBP8.84□□□□□ -1
CDH11-202ENST00000394156 SCNN1AP37088 669 aa8.84□□□□□ -1
CDH11-202ENST00000394156 GNALP38405 381 aa8.84□□□□□ -1
CDH11-202ENST00000394156 PNLIPRP1P54315 467 aa8.84□□□□□ -1
CDH11-202ENST00000394156 TBPL1P62380 186 aa8.84□□□□□ -1
CDH11-202ENST00000394156 DLG1Q12959 904 aa8.84□□□□□ -1
CDH11-202ENST00000394156 LARS2Q15031 903 aaKnown RBP8.84□□□□□ -1
CDH11-202ENST00000394156 ARHGAP40Q5TG30 622 aa8.84□□□□□ -1
CDH11-202ENST00000394156 ZNF776Q68DI1 518 aaPredicted RBP8.84□□□□□ -1
CDH11-202ENST00000394156 KIAA0408Q6ZU52 694 aa8.84□□□□□ -1
CDH11-202ENST00000394156 TMBIM1Q969X1 311 aa8.84□□□□□ -1
CDH11-202ENST00000394156 COPS7AQ9UBW8 275 aa8.84□□□□□ -1
CDH11-202ENST00000394156 MED31Q9Y3C7 131 aa8.84□□□□□ -1
CDH11-202ENST00000394156 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SRRM3A6NNA2 597 aaPredicted RBP8.83□□□□□ -1
CDH11-202ENST00000394156 S1PR4O95977 384 aa8.83□□□□□ -1
CDH11-202ENST00000394156 CLUP10909 449 aa8.83□□□□□ -1
CDH11-202ENST00000394156 CD1DP15813 335 aa8.83□□□□□ -1
CDH11-202ENST00000394156 BNC1Q01954 994 aa8.83□□□□□ -1
CDH11-202ENST00000394156 HEPACAMQ14CZ8 416 aa8.83□□□□□ -1
CDH11-202ENST00000394156 LACTB2Q53H82 288 aaPredicted RBP8.83□□□□□ -1
CDH11-202ENST00000394156 ARMC3Q5W041 872 aa8.83□□□□□ -1
CDH11-202ENST00000394156 GPER1Q99527 375 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SLC46A2Q9BY10 475 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SLC35C2Q9NQQ7 365 aa8.83□□□□□ -1
CDH11-202ENST00000394156 DBIP07108 87 aaKnown RBP8.83□□□□□ -1
CDH11-202ENST00000394156 PSMB5P28074 263 aa8.83□□□□□ -1
CDH11-202ENST00000394156 RPS3AP61247 264 aaKnown RBP8.83□□□□□ -1
CDH11-202ENST00000394156 STXBP1P61764 594 aaKnown RBP8.83□□□□□ -1
CDH11-202ENST00000394156 ERVK-8P63133 956 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SKP1P63208 163 aa8.83□□□□□ -1
CDH11-202ENST00000394156 GHRHRQ02643 423 aa8.83□□□□□ -1
CDH11-202ENST00000394156 MEP1AQ16819 746 aa8.83□□□□□ -1
CDH11-202ENST00000394156 DEFB133Q30KQ1 61 aa8.83□□□□□ -1
CDH11-202ENST00000394156 GALNT18Q6P9A2 607 aa8.83□□□□□ -1
CDH11-202ENST00000394156 OR5AR1Q8NGP9 310 aa8.83□□□□□ -1
CDH11-202ENST00000394156 ZBTB26Q9HCK0 441 aa8.83□□□□□ -1
CDH11-202ENST00000394156 DLGAP4Q9Y2H0 992 aa8.83□□□□□ -1
CDH11-202ENST00000394156 UBR3Q6ZT12 1888 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SH3BP2P78314 561 aa8.83□□□□□ -1
CDH11-202ENST00000394156 RPTNQ6XPR3 784 aa8.83□□□□□ -1
CDH11-202ENST00000394156 TBC1D21Q8IYX1 336 aa8.83□□□□□ -1
CDH11-202ENST00000394156 ZBTB8BQ8NAP8 495 aaPredicted RBP8.83□□□□□ -1
CDH11-202ENST00000394156 ZNF248Q8NDW4 579 aa8.83□□□□□ -1
CDH11-202ENST00000394156 MSLNLQ96KJ4 702 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SPATA5L1Q9BVQ7 753 aa8.83□□□□□ -1
CDH11-202ENST00000394156 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
CDH11-202ENST00000394156 ARHGEF33A8MVX0 844 aa8.83□□□□□ -1
CDH11-202ENST00000394156 J3QRK9 145 aa8.83□□□□□ -1
CDH11-202ENST00000394156 CLDN4O14493 209 aa8.83□□□□□ -1
CDH11-202ENST00000394156 PMM2O15305 246 aa8.83□□□□□ -1
CDH11-202ENST00000394156 ALPPP05187 535 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SLC3A1Q07837 685 aa8.83□□□□□ -1
CDH11-202ENST00000394156 SLAMF1Q13291 335 aa8.83□□□□□ -1
CDH11-202ENST00000394156 NADSYN1Q6IA69 706 aa8.83□□□□□ -1
CDH11-202ENST00000394156 AQP11Q8NBQ7 271 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms