RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PGDP52209 483 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 RPS15AP62244 130 aaKnown RBP29.28■■■□□ 2.28
CMTM4-202ENST00000394106 USP10Q14694 798 aaKnown RBP29.28■■■□□ 2.28
CMTM4-202ENST00000394106 OR56A3Q8NH54 315 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 TSPAN17Q96FV3 270 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 SPSB2Q99619 263 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 TRIM4Q9C037 500 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 P4HTMQ9NXG6 502 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 CTNNAL1Q9UBT7 734 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 NXT1Q9UKK6 140 aaKnown RBP29.28■■■□□ 2.28
CMTM4-202ENST00000394106 CDC14AQ9UNH5 594 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 FEZF1A0PJY2 475 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 OCA2Q04671 838 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 PPP1R3AQ16821 1122 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 KBTBD12Q3ZCT8 623 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 PRSS58Q8IYP2 241 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 PPM1NQ8N819 430 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 FBF1Q8TES7 1133 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 ANKRD7Q92527 254 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 YIPF2Q9BWQ6 316 aa29.27■■■□□ 2.28
CMTM4-202ENST00000394106 UNKQ9C0B0 810 aaKnown RBP29.27■■■□□ 2.28
CMTM4-202ENST00000394106 C1QAP02745 245 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 STX2P32856 288 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 GARNL3Q5VVW2 1013 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 FRA10AC1Q70Z53 315 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 MMABQ96EY8 250 aaPredicted RBP29.26■■■□□ 2.27
CMTM4-202ENST00000394106 FER1L6-AS2Q96M78 137 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 EGFL8Q99944 293 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 ZDHHC18Q9NUE0 388 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 ZNF282Q9UDV7 671 aaPredicted RBP29.26■■■□□ 2.27
CMTM4-202ENST00000394106 ANAPC2Q9UJX6 822 aa29.26■■■□□ 2.27
CMTM4-202ENST00000394106 G3BP2Q9UN86 482 aaKnown RBP29.26■■■□□ 2.27
CMTM4-202ENST00000394106 PCDHGA9Q9Y5G4 932 aaKnown RBP29.26■■■□□ 2.27
CMTM4-202ENST00000394106 GCN1Q92616 2671 aaKnown RBP29.26■■■□□ 2.27
CMTM4-202ENST00000394106 FFAR3O14843 346 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 GPR42O15529 346 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 PHGDHO43175 533 aaKnown RBP29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MMP11P24347 488 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 GRK3P35626 688 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 KLRB1Q12918 225 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 RAPSNQ13702 412 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 TSNQ15631 228 aaKnown RBP29.25■■■□□ 2.27
CMTM4-202ENST00000394106 DCAF10Q5QP82 559 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 VN1R4Q7Z5H5 301 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 SPATA6LQ8N4H0 392 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MMGT1Q8N4V1 131 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MNS1Q8NEH6 495 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 FDCSPQ8NFU4 85 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MIEF2Q96C03 454 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MVB12AQ96EY5 273 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 OR4K3Q96R72 315 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 GPR22Q99680 433 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 MACROD1Q9BQ69 325 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 DRC3Q9H069 523 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 BSNQ9UPA5 3926 aa29.25■■■□□ 2.27
CMTM4-202ENST00000394106 KCNE1BA0A087WTH5 132 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 A0A0A6YYC8 382 aaPredicted RBP29.24■■■□□ 2.27
CMTM4-202ENST00000394106 VSTM2BA6NLU5 285 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 I3L1I5 382 aaPredicted RBP29.24■■■□□ 2.27
CMTM4-202ENST00000394106 MASP2O00187 686 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 PRPF4O43172 522 aaKnown RBP eCLIP29.24■■■□□ 2.27
CMTM4-202ENST00000394106 CEACAM4O75871 244 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 FAM155BO75949 473 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 IGHEP01854 428 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 ANXA5P08758 320 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 BCL6P41182 706 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 CCR8P51685 355 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 NDUFA9Q16795 377 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 ADAMTSL2Q86TH1 951 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 ARHGEF39Q8N4T4 335 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 TEX19Q8NA77 164 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 CLEC1AQ8NC01 280 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 NOA1Q8NC60 698 aaKnown RBP29.24■■■□□ 2.27
CMTM4-202ENST00000394106 STT3BQ8TCJ2 826 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 THAP11Q96EK4 314 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 TRPC4Q9UBN4 977 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 MRPS2Q9Y399 296 aaKnown RBP29.24■■■□□ 2.27
CMTM4-202ENST00000394106 OARD1Q9Y530 152 aa29.24■■■□□ 2.27
CMTM4-202ENST00000394106 KIF2AO00139 706 aaPredicted RBP29.23■■■□□ 2.27
CMTM4-202ENST00000394106 FOXS1O43638 330 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 TUBB4AP04350 444 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 ZGLP1P0C6A0 271 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 STMN1P16949 149 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 SPRP35270 261 aaPredicted RBP29.23■■■□□ 2.27
CMTM4-202ENST00000394106 MEF2AQ02078 507 aaPredicted RBP29.23■■■□□ 2.27
CMTM4-202ENST00000394106 KLC1Q07866 573 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 DSG2Q14126 1118 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 EFTUD2Q15029 972 aaKnown RBP eCLIP29.23■■■□□ 2.27
CMTM4-202ENST00000394106 RBBP7Q16576 425 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 GRTP1Q5TC63 336 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 TSNARE1Q96NA8 513 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 CRB3Q9BUF7 120 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 NUDT9Q9BW91 350 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 DERL2Q9GZP9 239 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 MLXIPLQ9NP71 852 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 GPR83Q9NYM4 423 aa29.23■■■□□ 2.27
CMTM4-202ENST00000394106 CTAGE15A4D2H0 777 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 AGPSO00116 658 aa29.22■■■□□ 2.27
CMTM4-202ENST00000394106 LCMT2O60294 686 aaKnown RBP29.22■■■□□ 2.27
CMTM4-202ENST00000394106 WISP3O95389 354 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms