RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ALOX12BO75342 701 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 WDR47O94967 919 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 UMODP07911 640 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ANXA5P08758 320 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 RAB40ALP0C0E4 278 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 MYBL2P10244 700 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 NPPBP16860 134 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 VARSP26640 1264 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 PHBP35232 272 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 CCR10P46092 362 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 GLRBP48167 497 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCNC1P48547 511 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 AP1S2P56377 157 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 MAT1AQ00266 395 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 MC1RQ01726 317 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCNAB2Q13303 367 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 NAB1Q13506 487 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 RAPSNQ13702 412 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ATP1A4Q13733 1029 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRTGQ2VWP7 1150 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 MRPL14Q6P1L8 145 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 LCTLQ6UWM7 567 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 PRSS41Q7RTY9 318 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TMPRSS11BQ86T26 416 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ADAMTSL2Q86TH1 951 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SYVN1Q86TM6 617 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 THOC6Q86W42 341 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF843Q8N446 348 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 AMER2Q8N7J2 671 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZCCHC10Q8TBK6 192 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ADAMTS17Q8TE56 1095 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCTD4Q8WVF5 259 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 NEIL2Q969S2 332 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 RERGQ96A58 199 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 MOCOSQ96EN8 888 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 UBXN10Q96LJ8 280 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 CYTH2Q99418 400 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 PAFAH2Q99487 392 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 DPH2Q9BQC3 489 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TMEM79Q9BSE2 394 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TRIM54Q9BYV2 358 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ACSS3Q9H6R3 686 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ALG9Q9H6U8 611 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ZNF71Q9NQZ8 489 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SNX15Q9NRS6 342 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 IGSF5Q9NSI5 407 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 TMEM184CQ9NVA4 438 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 NOVA2Q9UNW9 492 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 POLHQ9Y253 713 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC22A14Q9Y267 594 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 OARD1Q9Y530 152 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 ASB1Q9Y576 335 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCNMB2Q9Y691 235 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 FAM208BQ5VWN6 2430 aa7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 SNRNP200O75643 2136 aaKnown RBP7.31□□□□□ -1.24
HMGB3P1-201ENST00000393368 CFAP46Q8IYW2 2715 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 A0A0A6YYC8 382 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 A6NL46 340 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 POC1B-GALNT4F8VUJ3 575 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PYCARD-AS1I3L0S3 204 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 I3L1I5 382 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 UBXN8O00124 270 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 FOXS1O43638 330 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR1F1O43749 312 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 B3GALT4O96024 378 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 ALDOAP04075 364 aaKnown RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 SERPIND1P05546 499 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 C2P06681 752 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 TFEBP19484 476 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 FBLP22087 321 aaKnown RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 FOLR3P41439 243 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC6A12P48065 614 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 HSPA7P48741 367 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 ARSFP54793 590 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 NFATC3Q12968 1075 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 NAA25Q14CX7 972 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 TGFBIQ15582 683 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 NKG7Q16617 165 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 VWA2Q5GFL6 755 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PPP1R32Q7Z5V6 425 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 MRGPREQ86SM8 312 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 GPSM1Q86YR5 675 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 RELL1Q8IUW5 271 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 CENPLQ8N0S6 344 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 KCT2Q8NC54 265 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 OR9A4Q8NGU2 314 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 APOBEC4Q8WW27 367 aaKnown RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC44A1Q8WWI5 657 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 SLC5A11Q8WWX8 675 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 ATL1Q8WXF7 558 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 COL26A1Q96A83 441 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 RHBDF1Q96CC6 855 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 NXNL1Q96CM4 212 aa7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 MMABQ96EY8 250 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P1-201ENST00000393368 CATSPER2Q96P56 530 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms