RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 UGDHO60701 494 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 PEX11AO75192 247 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 PRR35P0CG20 571 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 ERGP11308 486 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 SLC2A4P14672 509 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 XRCC1P18887 633 aaPredicted RBP13.07□□□□□ -0.32
PTN-202ENST00000393083 SLC19A1P41440 591 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 ATP4BP51164 291 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 E2F1Q01094 437 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 TAP2Q03519 686 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 KRT33BQ14525 404 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 NR6A1Q15406 480 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 ATP6AP1LQ52LC2 224 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 SGO1Q5FBB7 561 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 SUSD1Q6UWL2 747 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 ASRGL1Q7L266 308 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 TMPRSS11BQ86T26 416 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
PTN-202ENST00000393083 RAB42Q8N4Z0 105 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 CMTM5Q96DZ9 223 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 CCDC3Q9BQI4 270 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 FARSBQ9NSD9 589 aaKnown RBP13.07□□□□□ -0.32
PTN-202ENST00000393083 CPNE7Q9UBL6 633 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
PTN-202ENST00000393083 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 KCNE2Q9Y6J6 123 aa13.07□□□□□ -0.32
PTN-202ENST00000393083 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 OR52A4PA6NMU1 304 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 ZNF839A8K0R7 811 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 SLC28A1O00337 649 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 RGS14O43566 566 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 ULK1O75385 1050 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 ADRB1P08588 477 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 MTHFD1P11586 935 aaKnown RBP13.06□□□□□ -0.32
PTN-202ENST00000393083 COX4I1P13073 169 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 JUPP14923 745 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 EZRP15311 586 aaKnown RBP13.06□□□□□ -0.32
PTN-202ENST00000393083 CCND1P24385 295 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 PTPN4P29074 926 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 HSD17B2P37059 387 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 INSM1Q01101 510 aaPredicted RBP13.06□□□□□ -0.32
PTN-202ENST00000393083 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 ZRSR2Q15696 482 aaKnown RBP13.06□□□□□ -0.32
PTN-202ENST00000393083 RPE65Q16518 533 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 IMPG1Q17R60 797 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 THEMIS2Q5TEJ8 643 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 PRAMEF13Q5VWM6 474 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 LIPJQ5W064 366 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 OGFOD2Q6N063 350 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 SPATA19Q7Z5L4 167 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 SELENOMQ8WWX9 145 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 USP7Q93009 1102 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 MIPEPQ99797 713 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 MVB12BQ9H7P6 319 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTN-202ENST00000393083 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 HEATR5BQ9P2D3 2071 aa13.06□□□□□ -0.32
PTN-202ENST00000393083 SNRNP200O75643 2136 aaKnown RBP13.06□□□□□ -0.32
PTN-202ENST00000393083 RP1P56715 2156 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 MED19A0JLT2 244 aaPredicted RBP13.05□□□□□ -0.32
PTN-202ENST00000393083 RHPN2P1A8MT19 583 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 B4GAT1O43505 415 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 PDYNP01213 254 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 GNAZP19086 355 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 CD22P20273 847 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 HNF4AP41235 474 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 CLDN6P56747 220 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 ERVK-8P63133 956 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 KCNJ2P63252 427 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 MXRA7P84157 204 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 HHEXQ03014 270 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 DOC2AQ14183 400 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 HERC3Q15034 1050 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 CYP2A13Q16696 494 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 CDCP2Q5VXM1 449 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 LCTLQ6UWM7 567 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 GK5Q6ZS86 529 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 Q6ZSR9 355 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 SNX32Q86XE0 403 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 C2orf73Q8N5S3 287 aaPredicted RBP13.05□□□□□ -0.32
PTN-202ENST00000393083 NEIL2Q969S2 332 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 MTFMTQ96DP5 389 aaKnown RBP13.05□□□□□ -0.32
PTN-202ENST00000393083 PPP3R2Q96LZ3 170 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 RAB11FIP5Q9BXF6 653 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 SH2B3Q9UQQ2 575 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 HEBP2Q9Y5Z4 205 aa13.05□□□□□ -0.32
PTN-202ENST00000393083 PRAMEF33A0A0G2JMD5 474 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 A0A1W2PQM1 296 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 B2RBV5 119 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 PSMD12O00232 456 aaPredicted RBP13.04□□□□□ -0.32
PTN-202ENST00000393083 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
PTN-202ENST00000393083 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
PTN-202ENST00000393083 WFS1O76024 890 aa13.04□□□□□ -0.32
PTN-202ENST00000393083 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms