RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 AIF1LQ9BQI0 150 aa24.31■■□□□ 1.48
HOMER3-202ENST00000392351 MECRQ9BV79 373 aa24.31■■□□□ 1.48
HOMER3-202ENST00000392351 EHD1Q9H4M9 534 aa24.31■■□□□ 1.48
HOMER3-202ENST00000392351 ZBTB26Q9HCK0 441 aa24.31■■□□□ 1.48
HOMER3-202ENST00000392351 SEMA4BQ9NPR2 832 aaPredicted RBP24.31■■□□□ 1.48
HOMER3-202ENST00000392351 B3GALT1Q9Y5Z6 326 aa24.31■■□□□ 1.48
HOMER3-202ENST00000392351 TMEM120BA0PK00 339 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 CTSBP07858 339 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 FGF5P12034 268 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 CDH13P55290 713 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 RPS15AP62244 130 aaKnown RBP24.3■■□□□ 1.48
HOMER3-202ENST00000392351 REEP5Q00765 189 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 DOC2AQ14183 400 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 UNC50Q53HI1 259 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 TMEM164Q5U3C3 297 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 LIPMQ5VYY2 423 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 CCNYL1Q8N7R7 359 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 OR8K5Q8NH50 307 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 PTCD3Q96EY7 689 aaKnown RBP24.3■■□□□ 1.48
HOMER3-202ENST00000392351 DDA1Q9BW61 102 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 ASPSCR1Q9BZE9 553 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 NOL11Q9H8H0 719 aaKnown RBP24.3■■□□□ 1.48
HOMER3-202ENST00000392351 SYNPO2LQ9H987 977 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 IRAK4Q9NWZ3 460 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 GEMIN8Q9NWZ8 242 aaKnown RBP24.3■■□□□ 1.48
HOMER3-202ENST00000392351 SERTAD3Q9UJW9 196 aa24.3■■□□□ 1.48
HOMER3-202ENST00000392351 LOC105369274A0A096LPK9 316 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 LOC102723532A0A0G2JNH3 316 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 C9orf172C9J069 976 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ALDH3A1P30838 453 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ARL1P40616 181 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 BCL6P41182 706 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ITGA1P56199 1179 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 VSX2P58304 361 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 DNAJB13P59910 316 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 SLBPQ14493 270 aaKnown RBP eCLIP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 BPHLQ86WA6 291 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 OR4N4Q8N0Y3 316 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 LSMEM2Q8N112 164 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ATP6V1E2Q96A05 226 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 OR2A5Q96R48 311 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ASPMQ8IZT6 3477 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 FREM2Q5SZK8 3169 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 TRBC2A0A5B9 178 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 H0YGG7 62 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 OR1F1O43749 312 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 BRINP1O60477 761 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 H2AFYO75367 372 aaKnown RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 OR2B3O76000 313 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 TSPAN8P19075 237 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 CD22P20273 847 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 NAGLUP54802 743 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ARF3P61204 181 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 TBCCQ15814 346 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 IGF2-ASQ6U949 168 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 MYLK4Q86YV6 388 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 GPR135Q8IZ08 494 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 TBC1D19Q8N5T2 526 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ANKRD42Q8N9B4 389 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 OR52B6Q8NGF0 335 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 RERGQ96A58 199 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 WDR34Q96EX3 536 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 TEFMQ96QE5 360 aaKnown RBP24.29■■□□□ 1.48
HOMER3-202ENST00000392351 EFCAB11Q9BUY7 163 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 ACTR8Q9H981 624 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 PCDHGA4Q9Y5G9 962 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 PCDHGA3Q9Y5H0 932 aa24.29■■□□□ 1.48
HOMER3-202ENST00000392351 SDK2Q58EX2 2172 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 HMGB1P1B2RPK0 211 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 OR7A17O14581 309 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 LCMT2O60294 686 aaKnown RBP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 SRPX2O60687 465 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 WFS1O76024 890 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 EIF2S1P05198 315 aaKnown RBP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 CXCR2P25025 360 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 CASP2P42575 452 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 CCNG1P51959 295 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 CLCQ05315 142 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 PCDH1Q08174 1060 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 RBBP7Q16576 425 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 PWWP2BQ6NUJ5 590 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 KRT78Q8N1N4 520 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 TRPC4APQ8TEL6 797 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 RNF31Q96EP0 1072 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 ZPBPQ9BS86 351 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 SARGQ9BW04 601 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 SPRTNQ9H040 489 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-202ENST00000392351 ASCL3Q9NQ33 180 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 FOXJ2Q9P0K8 574 aa24.28■■□□□ 1.48
HOMER3-202ENST00000392351 FRYQ5TBA9 3013 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 H3BMH7 237 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 DYNC1I1O14576 645 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 TRIM13O60858 407 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 DXOO77932 396 aaKnown RBP24.27■■□□□ 1.48
HOMER3-202ENST00000392351 TIAF1O95411 115 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 HPDP32754 393 aaPredicted RBP24.27■■□□□ 1.48
HOMER3-202ENST00000392351 SERPINB4P48594 390 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 E2F2Q14209 437 aa24.27■■□□□ 1.48
HOMER3-202ENST00000392351 RBBP5Q15291 538 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms