RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CNTN5O94779 1100 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 HLA-DQB2P05538 268 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 SPANXN4Q5MJ08 99 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 C10orf62Q5T681 223 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 KIF18BQ86Y91 864 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 CFAP52Q8N1V2 620 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF248Q8NDW4 579 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 FBXO27Q8NI29 283 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 CNIH3Q8TBE1 160 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 PCED1BQ96HM7 432 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 CDK15Q96Q40 435 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 BARD1Q99728 777 aaKnown RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 TTYH2Q9BSA4 534 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 SLC35G4P0C7Q5 338 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 HTR2BP41595 481 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 PRR5P85299 388 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 OR8D1Q8WZ84 308 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 PCDHGC4Q9Y5F7 938 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 APOC1P02654 83 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 SLC10A7Q0GE19 358 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 RAPSNQ13702 412 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 FAM171BQ6P995 826 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 NCEH1Q6PIU2 408 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 PLCZ1Q86YW0 608 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ZBED6CLQ96FA7 236 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 VMP1Q96GC9 406 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 TWNKQ96RR1 684 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 NPLQ9BXD5 320 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 IFT52Q9Y366 437 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 N6AMT1Q9Y5N5 214 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 RGPD5Q99666 1765 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 C1RP00736 705 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 PPP1R3AQ16821 1122 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ATP13A5Q4VNC0 1218 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 C6orf136Q5SQH8 315 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 SLC39A4Q6P5W5 647 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 C17orf99Q6UX52 265 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 RANBP3LQ86VV4 465 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 SLC35F5Q8WV83 523 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 JPH3Q8WXH2 748 aaPredicted RBP19.15■□□□□ 0.66
SHANK1-203ENST00000391813 ZNF599Q96NL3 588 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 FOLH1BQ9HBA9 442 aa19.15■□□□□ 0.66
SHANK1-203ENST00000391813 OR10H2O60403 315 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 SLC19A2O60779 497 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 CRISP3P54108 245 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 GANABQ14697 944 aaKnown RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 OR4F3Q6IEY1 312 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 RHBGQ9H310 441 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 ENAMQ9NRM1 1142 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 SNX10Q9Y5X0 201 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 BCAS1O75363 584 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 MAP2K4P45985 399 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 DIO3P55073 304 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 MEDAGQ5VYS4 303 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 NMUR1Q9HB89 426 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 PIGVQ9NUD9 493 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 A0A1B0GVM2 712 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 ANXA2P2A6NMY6 339 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 IRAK2O43187 625 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 PRAMEF12O95522 483 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 ANXA2P07355 339 aaKnown RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 C8AP07357 584 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 GET4Q7L5D6 327 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 TMC8Q8IU68 726 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 CILP2Q8IUL8 1156 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 CMTR2Q8IYT2 770 aaKnown RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 DNAJA4Q8WW22 397 aaPredicted RBP19.14■□□□□ 0.65
SHANK1-203ENST00000391813 LRCH3Q96II8 777 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 LHPPQ9H008 270 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 C14orf119Q9NWQ9 140 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 PCDHGB5Q9Y5G0 923 aa19.14■□□□□ 0.65
SHANK1-203ENST00000391813 A0A1W2PRB8 838 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 AXIN1O15169 862 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 ACADLP28330 430 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 SP2Q02086 613 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 GPR33Q49SQ1 333 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 MFSD2AQ8NA29 543 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 OR13C4Q8NGS5 318 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 TFAP2CQ92754 450 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 EXOSC8Q96B26 276 aaKnown RBP19.13■□□□□ 0.65
SHANK1-203ENST00000391813 PEBP4Q96S96 227 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 BTBD1Q9H0C5 482 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 SLC32A1Q9H598 525 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 KCNK13Q9HB14 408 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 OR51F1A6NGY5 319 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 GRM6O15303 877 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 EEDO75530 441 aaKnown RBP19.13■□□□□ 0.65
SHANK1-203ENST00000391813 SPATA31D3P0C874 917 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 SLC5A2P31639 672 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 TECRLQ5HYJ1 363 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 SPATA31D4Q6ZUB0 917 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 TMEM135Q86UB9 458 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 MGLLQ99685 303 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 TPT1P8Q9HAU6 139 aa19.13■□□□□ 0.65
SHANK1-203ENST00000391813 FARSBQ9NSD9 589 aaKnown RBP19.13■□□□□ 0.65
SHANK1-203ENST00000391813 TNFRSF10DQ9UBN6 386 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms