RNA–Protein interactions for RNA: ENST00000391440.2

RTL8B-201, Transcript of retrotransposon Gag like 8B, humanhuman

APPRIS P1 BASIC

Gene RTL8B, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8B-201ENST00000391440 CD38P28907 300 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 HNRNPH1P31943 449 aaKnown RBP16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PRDX1Q06830 199 aaKnown RBP16.94■□□□□ 0.3
RTL8B-201ENST00000391440 NFYCQ13952 458 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PIGGQ5H8A4 983 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PARGQ86W56 976 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 AMIGO1Q86WK6 493 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 FAM156AQ8NDB6 213 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 CDC26Q8NHZ8 85 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 UBE2E3Q969T4 207 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 SPACA7Q96KW9 195 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 AIF1LQ9BQI0 150 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 TMEM45AQ9NWC5 275 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 LEF1Q9UJU2 399 aaPredicted RBP16.94■□□□□ 0.3
RTL8B-201ENST00000391440 POMPQ9Y244 141 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 H0Y3Z8 333 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 FOXE1O00358 373 aaPredicted RBP16.94■□□□□ 0.3
RTL8B-201ENST00000391440 KDM1AO60341 852 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 CYP4F2P78329 520 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 ZNF423Q2M1K9 1284 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 TRMT5Q32P41 509 aaKnown RBP16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PRRT3Q5FWE3 981 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 SPANXN4Q5MJ08 99 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 IYDQ6PHW0 289 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 TSSK4Q6SA08 328 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 HACD2Q6Y1H2 254 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PLD3Q8IV08 490 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 TRIM48Q8IWZ4 208 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 HIPK4Q8NE63 616 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 ABHD11Q8NFV4 315 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 LRRC58Q96CX6 371 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 TRIM8Q9BZR9 551 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 PELI2Q9HAT8 420 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 SPAG4Q9NPE6 437 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 GID8Q9NWU2 228 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
RTL8B-201ENST00000391440 ARHGEF17Q96PE2 2063 aaPredicted RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 IGKV1-8A0A0C4DH67 115 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 AKAP10O43572 662 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 JUNDP17535 347 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 PEBP1P30086 187 aaKnown RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 SLC7A2P52569 658 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 CLDN8P56748 225 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 PLCL1Q15111 1095 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 COQ5Q5HYK3 327 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 ARMCX6Q7L4S7 300 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 LPCAT2Q7L5N7 544 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 VN1R5Q7Z5H4 357 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 ANKRD53Q8N9V6 530 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 MFSD2AQ8NA29 543 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 DNAJB14Q8TBM8 379 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 CHTF18Q8WVB6 975 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 SRMSQ9H3Y6 488 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 CLMPQ9H6B4 373 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 MRPS30Q9NP92 439 aaKnown RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 APOBEC3BQ9UH17 382 aaKnown RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 RUVBL1Q9Y265 456 aaKnown RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 FANCMQ8IYD8 2048 aa16.93■□□□□ 0.3
RTL8B-201ENST00000391440 TDRD6O60522 2096 aaKnown RBP16.93■□□□□ 0.3
RTL8B-201ENST00000391440 MUC3AQ02505 3323 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ISM1B1AKI9 464 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 MYO1DO94832 1006 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 XRCC1P18887 633 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 CXCR2P25025 360 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 BLKP51451 505 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ATXN3P54252 364 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ACTR3P61158 418 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 RAE1P78406 368 aaKnown RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 C8orf82Q6P1X6 216 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 GLB1L3Q8NCI6 653 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 KLHL20Q9Y2M5 609 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 A0A1W2PR77 199 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ANKDD1BA6NHY2 528 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 FXYD1O00168 92 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 TLR4O00206 839 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 OR1F1O43749 312 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 PRICKLE3O43900 615 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 VIPP01282 170 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 GBAP04062 536 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 CHRM5P08912 532 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ME2P23368 584 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 SHMT2P34897 504 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 PIK3CBP42338 1070 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 RACK1P63244 317 aaKnown RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 CSNK1G2P78368 415 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 PHEXP78562 749 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 ZXDAP98168 799 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 PGS1Q32NB8 556 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 FBXL6Q8N531 539 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 OR4K1Q8NGD4 311 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 FAM174AQ8TBP5 190 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 STMN2Q93045 179 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 C11orf24Q96F05 449 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 FCRL1Q96LA6 429 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 HOPXQ9BPY8 73 aaPredicted RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 GPATCH1Q9BRR8 931 aaKnown RBP16.92■□□□□ 0.3
RTL8B-201ENST00000391440 TM9SF3Q9HD45 589 aa16.92■□□□□ 0.3
RTL8B-201ENST00000391440 NMRK1Q9NWW6 199 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms