RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ANKRD54Q6NXT1 300 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 AAGABQ6PD74 315 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 TECPR1Q7Z6L1 1165 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 TFAP2DQ7Z6R9 452 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 UEVLDQ8IX04 471 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 LCORLQ8N3X6 602 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 LINC01356Q8N9X3 169 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 TP53I13Q8NBR0 393 aaPredicted RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 U2AF1L4Q8WU68 220 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SYN2Q92777 582 aaPredicted RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 ULK4Q96C45 1275 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SLC41A3Q96GZ6 507 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PBKQ96KB5 322 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 FAM81BQ96LP2 452 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SLC22A12Q96S37 553 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SIKE1Q9BRV8 207 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 LRRCC1Q9C099 1032 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 COG4Q9H9E3 785 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SEC61A2Q9H9S3 476 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 GPR173Q9NS66 373 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 THEGQ9P2T0 379 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SLC9A2Q9UBY0 812 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 KIF16BQ96L93 1317 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 CRYBG1Q9Y4K1 1723 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 ANKRD61A6NGH8 418 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 MROH6A6NGR9 719 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 AHRRA9YTQ3 701 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 TMEM189-UBE2V1I3L0A0 370 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 GRID2O43424 1007 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 AKAP8O43823 692 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 KIF1BO60333 1816 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 OR10H2O60403 315 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SF3B1O75533 1304 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 CDKL5O76039 1030 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 MOCS2O96007 188 aaPredicted RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 LCKP06239 509 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 EPCAMP16422 314 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FBLP22087 321 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PTBP1P26599 531 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FCGR2BP31994 310 aaPredicted RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ADRA1AP35348 466 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 NUDT6P53370 316 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SUCLG1P53597 346 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PRMT2P55345 433 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FOXL1Q12952 345 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 UBE2V1Q13404 147 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PTGISQ16647 500 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SYT16Q17RD7 645 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SMTNL2Q2TAL5 461 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 KIAA1755Q5JYT7 1200 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ARMC6Q6NXE6 501 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 VSTM1Q6UX27 236 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SIGLEC15Q6ZMC9 328 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ZNF517Q6ZMY9 492 aaPredicted RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SLC16A9Q7RTY1 509 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 BCDIN3DQ7Z5W3 292 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ATG4DQ86TL0 474 aaPredicted RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FAM228AQ86W67 206 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SBF2Q86WG5 1849 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PRAG1Q86YV5 1406 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 STHQ8IWL8 128 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SUN5Q8TC36 379 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PARD3Q8TEW0 1356 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FUBP1Q96AE4 644 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PGM2Q96G03 612 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 SENP8Q96LD8 212 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 BTBD9Q96Q07 612 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ALG12Q9BV10 488 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 GPR87Q9BY21 358 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 MRPL13Q9BYD1 178 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 CIPCQ9C0C6 399 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 TRPV6Q9H1D0 765 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ESRP2Q9H6T0 727 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 PPP1R3EQ9H7J1 279 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 WDR76Q9H967 626 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 FN3KRPQ9HA64 309 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 MRPL17Q9NRX2 175 aaKnown RBP6.12□□□□□ -1.43
TRAV35-201ENST00000390462 CYSLTR2Q9NS75 346 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 TXNDC16Q9P2K2 825 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 RHCGQ9UBD6 479 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 B3GALT5Q9Y2C3 310 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 GRIP1Q9Y3R0 1128 aa6.12□□□□□ -1.43
TRAV35-201ENST00000390462 ANKRD30AQ9BXX3 1397 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 MAGEB16A2A368 324 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 SLC15A5A6NIM6 579 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 ANKRD30BLA7E2S9 258 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 A8MUI8 341 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 ADAM12O43184 909 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 LRRTM2O43300 516 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 LPXNO60711 386 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 MTRF1O75570 445 aaKnown RBP6.11□□□□□ -1.43
TRAV35-201ENST00000390462 NEURL1O76050 574 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 GSRP00390 522 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 IGHV2-70P01814 119 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 CSF2P04141 144 aa6.11□□□□□ -1.43
TRAV35-201ENST00000390462 NCF2P19878 526 aaPredicted RBP6.11□□□□□ -1.43
TRAV35-201ENST00000390462 MAOAP21397 527 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms