RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ACTR10Q9NZ32 417 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 OR1F1O43749 312 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 PRPH2P23942 346 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 ARRB1P49407 418 aaPredicted RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 UFM1P61960 85 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 CYP4F2P78329 520 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 ACTN3Q08043 901 aaPredicted RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 LPAL2Q16609 132 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 SMU1Q2TAY7 513 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 ZNF528Q3MIS6 628 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 CYP20A1Q6UW02 462 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 VN1R5Q7Z5H4 357 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 SLC25A45Q8N413 288 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 ANKRD53Q8N9V6 530 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 OR2A14Q96R47 310 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 HRASLS2Q9NWW9 162 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 FAM86C2PA6NEL3 165 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 FOXE1O00358 373 aaPredicted RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 UGT2B7P16662 529 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 TYRP1P17643 537 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 PTPN4P29074 926 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 PHEXP78562 749 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 HERC3Q15034 1050 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 SHBQ15464 509 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 ZNF423Q2M1K9 1284 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 C10orf62Q5T681 223 aaPredicted RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 CACHD1Q5VU97 1274 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 FUNDC1Q8IVP5 155 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 LIX1Q8N485 282 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 FLVCR1-AS1Q8TAF5 88 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 TEX37Q96LM6 180 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 MRPL1Q9BYD6 325 aaKnown RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 TMEM184CQ9NVA4 438 aa25.75■■□□□ 1.71
MSX1-201ENST00000382723 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.75■■□□□ 1.71
MSX1-201ENST00000382723 RRP15Q9Y3B9 282 aaKnown RBP25.75■■□□□ 1.71
MSX1-201ENST00000382723 FAM221BA6H8Z2 402 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 ANKDD1BA6NHY2 528 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 AMD1P17707 334 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 PIK3CBP42338 1070 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 CUL3Q13618 768 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 PDCD4Q53EL6 469 aaKnown RBP25.74■■□□□ 1.71
MSX1-201ENST00000382723 ASRGL1Q7L266 308 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 ZBTB44Q8NCP5 570 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 GPR156Q8NFN8 814 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 LRMDAQ9H2I8 198 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 OR51B5Q9H339 312 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 DLGAP4Q9Y2H0 992 aa25.74■■□□□ 1.71
MSX1-201ENST00000382723 SAP18O00422 153 aaKnown RBP25.73■■□□□ 1.71
MSX1-201ENST00000382723 LCMT2O60294 686 aaKnown RBP25.73■■□□□ 1.71
MSX1-201ENST00000382723 GRK3P35626 688 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 FASLGP48023 281 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 ACADVLP49748 655 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 MNAT1P51948 309 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 AVL9Q8NBF6 648 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 TAS2R1Q9NYW7 299 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 BAIAP2L1Q9UHR4 511 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 C2orf74A8MZ97 194 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 NPIPB8E9PQR5 432 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 NR5A2O00482 541 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 HAT1O14929 419 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 SLC22A3O75751 556 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 BCKDHAP12694 445 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 HOXB3P14651 431 aaPredicted RBP25.73■■□□□ 1.71
MSX1-201ENST00000382723 IRX1P78414 480 aaPredicted RBP25.73■■□□□ 1.71
MSX1-201ENST00000382723 GRIK2Q13002 908 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 PTGR1Q14914 329 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 MAPRE2Q15555 327 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 OGFOD3Q6PK18 319 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 KYQ8NBH2 561 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 RBM15BQ8NDT2 890 aaKnown RBP25.73■■□□□ 1.71
MSX1-201ENST00000382723 BTBD10Q9BSF8 475 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 EBPLQ9BY08 206 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 RHBGQ9H310 441 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 SNX7Q9UNH6 387 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 TSC22D4Q9Y3Q8 395 aa25.73■■□□□ 1.71
MSX1-201ENST00000382723 TTC28Q96AY4 2481 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 PCM1Q15154 2024 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 AIM2O14862 343 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 GYG2O15488 501 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 SNRPB2P08579 225 aaKnown RBP25.72■■□□□ 1.71
MSX1-201ENST00000382723 GRIA3P42263 894 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 RXRGP48443 463 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 ACSM2AQ08AH3 577 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 C14orf28Q4W4Y0 310 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 PEAR1Q5VY43 1037 aaPredicted RBP25.72■■□□□ 1.71
MSX1-201ENST00000382723 ACSM2BQ68CK6 577 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 OOSP2Q86WS3 158 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 CLHC1Q8NHS4 586 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 RSC1A1Q92681 617 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 SLC38A3Q99624 504 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 PITHD1Q9GZP4 211 aaPredicted RBP25.72■■□□□ 1.71
MSX1-201ENST00000382723 TWSG1Q9GZX9 223 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 NT5DC2Q9H857 520 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 TMED5Q9Y3A6 229 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 CSNK1G3Q9Y6M4 447 aa25.72■■□□□ 1.71
MSX1-201ENST00000382723 TNRC6BQ9UPQ9 1833 aaKnown RBP25.71■■□□□ 1.71
MSX1-201ENST00000382723 PATE3B3GLJ2 98 aa25.71■■□□□ 1.71
MSX1-201ENST00000382723 MRPL19P49406 292 aaKnown RBP25.71■■□□□ 1.71
MSX1-201ENST00000382723 TBL3Q12788 808 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms