RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 C17orf64Q86WR6 236 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 FIBCD1Q8N539 461 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 COQ8AQ8NI60 647 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 ZBED6CLQ96FA7 236 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 TMEM80Q96HE8 168 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 RANBP3Q9H6Z4 567 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 CLCA3PQ9Y6N3 262 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 ANKRD36A6QL64 1941 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 H0YJX3 145 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 HOXA2O43364 376 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 IFNGP01579 166 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF806P0C7X5 589 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 PRKAR2AP13861 404 aaKnown RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 GABRR2P28476 465 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 ELAVL2Q12926 359 aaKnown RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 RFTN2Q52LD8 501 aaPredicted RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 INTS6LQ5JSJ4 861 aaKnown RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 LRCH3Q96II8 777 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 OR4K3Q96R72 315 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 TPT1P8Q9HAU6 139 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 ZDHHC7Q9NXF8 308 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 DNAJC27Q9NZQ0 273 aa4.08□□□□□ -1.76
BRCA2-201ENST00000380152 RUVBL1Q9Y265 456 aaKnown RBP4.08□□□□□ -1.76
BRCA2-201ENST00000380152 NME4O00746 187 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GRID2O43424 1007 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 OR1I1O60431 355 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C8GP07360 202 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GSTM2P28161 218 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 RPS24P62847 133 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PRR5P85299 388 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MLLT1Q03111 559 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SRSF11Q05519 484 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZMYND11Q15326 602 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PAGE3Q5JUK9 113 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 VARS2Q5ST30 1063 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CAPN13Q6MZZ7 669 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SLC30A6Q6NXT4 461 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ENPP6Q6UWR7 440 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CYP4V2Q6ZWL3 525 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TSPYL5Q86VY4 417 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PHYKPLQ8IUZ5 450 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CCDC36Q8IYA8 594 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 METTL25Q8N6Q8 603 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 NEIL3Q8TAT5 605 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TFAP2CQ92754 450 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 UPF1Q92900 1129 aaKnown RBP eCLIP4.07□□□□□ -1.762e-8■■■■■ 36.7
BRCA2-201ENST00000380152 RERGQ96A58 199 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CCDC115Q96NT0 180 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MGLLQ99685 303 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 NUSAP1Q9BXS6 441 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PIGUQ9H490 435 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TAS2R3Q9NYW6 316 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ERVK-18Q9QC07 812 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SPTBP11277 2137 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 A0A1W2PQL4 384 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LRRC14BA6NHZ5 514 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 M0R233 179 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CNTN5O94779 1100 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 IFNA16P05015 189 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DDX6P26196 483 aaKnown RBP eCLIP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PCSK6P29122 969 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CPOXP36551 454 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 NPRL3Q12980 569 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 BTG3Q14201 252 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GRM2Q14416 872 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 FAM180BQ6P0A1 224 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 METTL3Q86U44 580 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GEMIN6Q8WXD5 167 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HDHD5Q9BXW7 423 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SLC6A15Q9H2J7 730 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C3orf14Q9HBI5 128 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SEC14L4Q9UDX3 406 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SIX4Q9UIU6 781 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MAB21L2Q9Y586 359 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TRAV19A0A0A6YYK7 116 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 A0A1W2PRB8 838 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 C12orf71A8MTZ7 269 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 A8MU76 341 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 TDRD15B5MCY1 1934 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 LDB2O43679 373 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PCDH7O60245 1069 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 JUNP05412 331 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 KLK1P06870 262 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF10P21506 573 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 FOXA1P55317 472 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 HNRNPA0Q13151 305 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SPATS1Q496A3 300 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PRPF38BQ5VTL8 546 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GALNT10Q86SR1 603 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF366Q8N895 744 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MMP28Q9H239 520 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 MRM3Q9HC36 420 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SCN3AQ9NY46 2000 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CKLFQ9UBR5 152 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DICER1Q9UPY3 1922 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 DAPL1A0PJW8 107 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 GTPBP1O00178 669 aaKnown RBP4.07□□□□□ -1.76
BRCA2-201ENST00000380152 PSMD9O00233 223 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 SLC35G4P0C7Q5 338 aa4.07□□□□□ -1.76
BRCA2-201ENST00000380152 CELP19835 753 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms