RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ELAVL3Q14576 367 aaKnown RBP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 PHACTR4Q8IZ21 702 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 NUS1Q96E22 293 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 C11orf24Q96F05 449 aaPredicted RBP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 WRAP53Q9BUR4 548 aaKnown RBP20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SGK2Q9HBY8 427 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SLC2A4RGQ9NR83 387 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 DEC1Q9P2X7 70 aa20.81■□□□□ 0.92
TRIM54-202ENST00000380075 SPINT1O43278 529 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 SNAP29O95721 258 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 THRBP10828 461 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 NELFEP18615 380 aaKnown RBP20.8■□□□□ 0.92
TRIM54-202ENST00000380075 C9orf64Q5T6V5 341 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 OR4F3Q6IEY1 312 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 ERICH5Q6P6B1 374 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 TBPL2Q6SJ96 375 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 CLEC4FQ8N1N0 589 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 NMD3Q96D46 503 aaKnown RBP20.8■□□□□ 0.92
TRIM54-202ENST00000380075 FBXL20Q96IG2 436 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 EGLN2Q96KS0 407 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 LINC00615Q96LM1 132 aaPredicted RBP20.8■□□□□ 0.92
TRIM54-202ENST00000380075 OR4K3Q96R72 315 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 CARS2Q9HA77 564 aaKnown RBP20.8■□□□□ 0.92
TRIM54-202ENST00000380075 USE1Q9NZ43 259 aa20.8■□□□□ 0.92
TRIM54-202ENST00000380075 C17orf113A0A1B0GUU1 675 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 G3V2T6 193 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 PRKD3O94806 890 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 CCNDBP1O95273 360 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 C1orf105O95561 183 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 SOD1P00441 154 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ETS2P15036 469 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 GTF2H3Q13889 308 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 UGT8Q16880 541 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 SPIN4Q56A73 249 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 OTUD3Q5T2D3 398 aaPredicted RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 CAPN13Q6MZZ7 669 aaPredicted RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 PGBD3Q8N328 593 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ZCCHC7Q8N3Z6 543 aaKnown RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 LILRA3Q8N6C8 439 aaPredicted RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 FAM86B1Q8N7N1 296 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 AURKBQ96GD4 344 aaPredicted RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 REXO4Q9GZR2 422 aaKnown RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 SAMD4AQ9UPU9 718 aaKnown RBP20.79■□□□□ 0.92
TRIM54-202ENST00000380075 CEPT1Q9Y6K0 416 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 PRRT4C9JH25 899 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 LILRB5O75023 590 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 LRATO95237 230 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 PCNAP12004 261 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 COX7A2P14406 83 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ESRRGP62508 458 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 NKG7Q16617 165 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ITPRIPL2Q3MIP1 535 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 CAMKMTQ7Z624 323 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 STK32CQ86UX6 486 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ANKRD46Q86W74 232 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 ARRDC3Q96B67 414 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 PANX1Q96RD7 426 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 EBPLQ9BY08 206 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 TRPV5Q9NQA5 729 aa20.79■□□□□ 0.92
TRIM54-202ENST00000380075 FPGTO14772 594 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 EPN2O95208 641 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 CDH2P19022 906 aaPredicted RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 PBLDP30039 288 aaPredicted RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 CDKN2CP42773 168 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 GPR1P46091 355 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 SOX9P48436 509 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 LRRC74AQ0VAA2 488 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 TMEM52BQ4KMG9 183 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 DOK6Q6PKX4 331 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 PNPT1Q8TCS8 783 aaKnown RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 WDR34Q96EX3 536 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 PYURFQ96I23 114 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 MTERF1Q99551 399 aaKnown RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 RBM4BQ9BQ04 359 aaKnown RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 RBM4Q9BWF3 364 aaKnown RBP20.78■□□□□ 0.92
TRIM54-202ENST00000380075 SPATA9Q9BWV2 254 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 TRIM39Q9HCM9 518 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 ITM2CQ9NQX7 267 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 GPR34Q9UPC5 381 aa20.78■□□□□ 0.92
TRIM54-202ENST00000380075 GNGT2O14610 69 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 SCN2BO60939 215 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 SERPINA1P01009 418 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 GSNP06396 782 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 ADRB3P13945 408 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 PDHA2P29803 388 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 BIRC2Q13490 618 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CCSMST1Q4G0I0 132 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CCNYL2Q5T2Q4 361 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 TTC23Q5W5X9 447 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 NAIF1Q69YI7 327 aaPredicted RBP20.77■□□□□ 0.92
TRIM54-202ENST00000380075 MED27Q6P2C8 311 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CPA6Q8N4T0 437 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 OR7G3Q8NG95 312 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 NETO1Q8TDF5 533 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DNASE1L2Q92874 299 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DPEP2Q9H4A9 486 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 EHD1Q9H4M9 534 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DYRK4Q9NR20 520 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 RSL24D1Q9UHA3 163 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms