RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SMPDL3AQ92484 453 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 TGIF2Q9GZN2 237 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 P2RY12Q9H244 342 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 RAB6BQ9NRW1 208 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 HCN3Q9P1Z3 774 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 NEU2Q9Y3R4 380 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 ITPR3Q14573 2671 aa16.82■□□□□ 0.28
PDLIM4-202ENST00000379018 MTORP42345 2549 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 GOLGA8KD6RF30 607 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 GOLGA8TH3BQL2 631 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 HAT1O14929 419 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 SUN1O94901 812 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 MLYCDO95822 493 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 APRTP07741 180 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 EEF1DP29692 281 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 AVPR1BP47901 424 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 EMP3P54852 163 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 OC90Q02509 493 aaPredicted RBP16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 KLF1Q13351 362 aaPredicted RBP16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 ANKRD20A4Q4UJ75 823 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 GARNL3Q5VVW2 1013 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 ICE2Q659A1 982 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 SPINK14Q6IE38 97 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 MEX3BQ6ZN04 569 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 LRRC57Q8N9N7 239 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 ACRBPQ8NEB7 543 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 AGAP11Q8TF27 550 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 ZNF354BQ96LW1 612 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 OR2A5Q96R48 311 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 UTP23Q9BRU9 249 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 RBCK1Q9BYM8 510 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 LACRTQ9GZZ8 138 aa16.81■□□□□ 0.28
PDLIM4-202ENST00000379018 MAN1A2O60476 641 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 PHF2O75151 1096 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 SYF2O95926 243 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 AGAP20933 346 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 NMBRP28336 390 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 SNX1Q13596 522 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 NDUFA9Q16795 377 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 THEMIS2Q5TEJ8 643 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 PRSS41Q7RTY9 318 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 CRLF3Q8IUI8 442 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 SDCCAG3Q96C92 435 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 CYTH2Q99418 400 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 PKP4Q99569 1192 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 MACROD1Q9BQ69 325 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 UTP6Q9NYH9 597 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 C19orf25Q9UFG5 118 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 EPN1Q9Y6I3 576 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-202ENST00000379018 CCNDBP1O95273 360 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 PKMP14618 531 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 EZRP15311 586 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CD46P15529 392 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 IL1RNP18510 177 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CHRM3P20309 590 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 RPS3P23396 243 aaKnown RBP eCLIP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CD96P40200 585 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 XCR1P46094 333 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 PNLIPRP1P54315 467 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CSNK1G2P78368 415 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 TESK1Q15569 626 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 KRTCAP3Q53RY4 240 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 ACSBG2Q5FVE4 666 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 PCID2Q5JVF3 399 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 PLAG1Q6DJT9 500 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 ZNF425Q6IV72 752 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CES3Q6UWW8 571 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 GALNTL5Q7Z4T8 443 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 LRRC6Q86X45 466 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 SPNS2Q8IVW8 549 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 MDS2Q8NDY4 140 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 ZCCHC10Q8TBK6 192 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 THAP3Q8WTV1 239 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 C1orf54Q8WWF1 131 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CALR3Q96L12 384 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 TRIM5Q9C035 493 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 GALPQ9UBC7 116 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 ZNF835Q9Y2P0 537 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 CRYL1Q9Y2S2 319 aa16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 REXO2Q9Y3B8 237 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-202ENST00000379018 GABRR3A8MPY1 467 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 SMAPO00193 183 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 TXNDC9O14530 226 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 CDC123O75794 336 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 MATN4O95460 622 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 CAPN3P20807 821 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 MAPKAPK3Q16644 382 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 MEP1AQ16819 746 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 Q6ZPB1 254 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 ANKRD37Q7Z713 158 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 ARHGEF39Q8N4T4 335 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 TMEM178AQ8NBL3 297 aa16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 FAM98AQ8NCA5 519 aaKnown RBP16.78■□□□□ 0.28
PDLIM4-202ENST00000379018 OR51Q1Q8NH59 317 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms