RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 MYNNQ9NPC7 610 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 GIN1Q9NXP7 522 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 PTBP2Q9UKA9 531 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 VWA7Q9Y334 891 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 SLC1A7O00341 560 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 SERPINA6P08185 405 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RFC2P35250 354 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RAB5BP61020 215 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 ERVK-16P61578 105 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 ZC3HC1Q86WB0 502 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 TM9SF4Q92544 642 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 GLYATL1Q969I3 302 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF681Q96N22 645 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 FAM173AQ9BQD7 235 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 ERVW-1Q9UQF0 538 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 KIF1BO60333 1816 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 A0A1W2PQ45 241 aaPredicted RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 A0A1W2PQY0 241 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RPL35P42766 123 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 CAMLGP49069 296 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 PPP2CAP67775 309 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 TSTD1Q8NFU3 115 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 NLGN2Q8NFZ4 835 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 OR5AK3PQ8NH89 298 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RSPRY1Q96DX4 576 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 RRNAD1Q96FB5 475 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 UROC1Q96N76 676 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 GINS3Q9BRX5 216 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 EML1O00423 815 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 MT-ND5P03915 603 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 GRB2P62993 217 aaKnown RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 REP15Q6BDI9 236 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
HIPK3-202ENST00000379016 TGFB1P01137 390 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ALDH3B2P48448 385 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MLLT10P55197 1068 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MALLQ13021 153 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SAMD11Q96NU1 681 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 GHRLQ9UBU3 117 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 OR6C74A6NCV1 312 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SNCGO76070 127 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 APOC2P02655 101 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 IQCCQ4KMZ1 466 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF529Q6P280 563 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MTERF1Q99551 399 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 IPPKQ9H8X2 491 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 RAI2Q9Y5P3 530 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 A0A1W2PPK0 400 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 DDTLA6NHG4 134 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 HDAC3O15379 428 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SLC31A2O15432 143 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF84P51523 738 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 RAB31Q13636 194 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF460Q14592 562 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF410Q86VK4 478 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MRPL38Q96DV4 380 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 DPCDQ9BVM2 203 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ABHD16BQ9H3Z7 469 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 AGO3Q9H9G7 860 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MT-CO2P00403 227 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MAGEB1P43366 347 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SLC9A3P48764 834 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 FGL1Q08830 312 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 FXNQ16595 210 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 IFI44LQ53G44 452 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 C12orf29Q8N999 325 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 COPZ2Q9P299 210 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 CNTNAP5Q8WYK1 1306 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MSI1O43347 362 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MRPL3P09001 348 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 ARAFP10398 606 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms