RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ARMC12Q5T9G4 340 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR2T5Q6IEZ7 315 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 JAGN1Q8N5M9 183 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 CHDHQ8NE62 594 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 ELOA3Q8NG57 546 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR13C3Q8NGS6 347 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR2T29Q8NH02 315 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 MOCOSQ96EN8 888 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SLC22A11Q9NSA0 550 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 LGALS13Q9UHV8 139 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ZNF490Q9ULM2 529 aaPredicted RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 TCRBV9S1A1TA0A576 114 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 ARPC5O15511 151 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 GH2P01242 217 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 PRPS2P11908 318 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SUMO1P63165 101 aaKnown RBP8.53□□□□□ -1.04
LIG3-202ENST00000378526 SGCGQ13326 291 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 UBE2UQ5VVX9 321 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 BAGE2Q86Y30 109 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 OR4C15Q8NGM1 316 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 FEM1CQ96JP0 617 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SYT3Q9BQG1 590 aa8.53□□□□□ -1.04
LIG3-202ENST00000378526 SULT1C4O75897 302 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 HBE1P02100 147 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 COL6A1P12109 1028 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 SCNN1GP51170 649 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 TBX4P57082 545 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 RFWD3Q6PCD5 774 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 ZNF781Q8N8C0 355 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 CPT1CQ8TCG5 803 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 TWIST2Q8WVJ9 160 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 TECTBQ96PL2 329 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 MECRQ9BV79 373 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 ASPNQ9BXN1 380 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 PRRG4Q9BZD6 226 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 BCS1LQ9Y276 419 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 FBXO7Q9Y3I1 522 aa8.52□□□□□ -1.04
LIG3-202ENST00000378526 LIASO43766 372 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 NPHS1O60500 1241 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 FAM86B2P0C5J1 330 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MAPTP10636 758 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 MMP8P22894 467 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 PRPH2P23942 346 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 PAX6P26367 422 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 UBE2KP61086 200 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TBX2Q13207 712 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR5H6Q8NGV6 325 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 GLYATL2Q8WU03 294 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 FAM122AQ96E09 287 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MFSD3Q96ES6 412 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CRB3Q9BUF7 120 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ZNF696Q9H7X3 374 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ZBTB26Q9HCK0 441 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 FBXL4Q9UKA2 621 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 PCDHGA7Q9Y5G6 932 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 HLA-HP01893 362 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MFSD13AQ14CX5 517 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 SLC30A7Q8NEW0 376 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MR1Q95460 341 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MFSD14AQ96MC6 490 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 LRFN5Q96NI6 719 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TMEM109Q9BVC6 243 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BTRCQ9Y297 605 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TESMINQ9Y4I5 508 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 OTOL1A6NHN0 477 aaPredicted RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 TFPIP10646 304 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 GNRHRP30968 328 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ADH7P40394 386 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BRCC3P46736 316 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 BIDP55957 195 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 KIAA0895Q8NCT3 520 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ELMOD3Q96FG2 381 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 STRA6Q9BX79 667 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CIPCQ9C0C6 399 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 SEC14L2O76054 403 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 RCBTB2O95199 551 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 SNRNP70P08621 437 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 HNRNPLP14866 589 aaKnown RBP eCLIP8.52□□□□□ -1.05
LIG3-202ENST00000378526 RAB5AP20339 215 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 NFYBP25208 207 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CDK18Q07002 472 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ARL9Q6T311 187 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CARNMT1Q8N4J0 409 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TMEM143Q96AN5 459 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 C5orf34Q96MH7 638 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 WDR26Q9H7D7 661 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ALOX15BO15296 676 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 CSDE1O75534 798 aaKnown RBP8.52□□□□□ -1.05
LIG3-202ENST00000378526 CLDN9O95484 217 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 ITPKBP27987 946 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 SOX9P48436 509 aa8.52□□□□□ -1.05
LIG3-202ENST00000378526 TAS2R30P59541 319 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms