RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 EPYCQ99645 322 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 EFCAB11Q9BUY7 163 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ASPNQ9BXN1 380 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PCBD2Q9H0N5 130 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 FAM83DQ9H4H8 585 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SPON1Q9HCB6 807 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 HEBP1Q9NRV9 189 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 FARSBQ9NSD9 589 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 TBC1D14Q9P2M4 693 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 STUB1Q9UNE7 303 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 AGAP5A6NIR3 686 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SEC14L2O76054 403 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 POP4O95707 220 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 MPC1LP0DKB6 136 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 GTF2E2P29084 291 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CDK6Q00534 326 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PPP1R8Q12972 351 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 CBLBQ13191 982 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 SUZ12Q15022 739 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 EIF4HQ15056 248 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 LIPJQ5W064 366 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 KDELC1Q6UW63 502 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 C14orf80Q86SX3 495 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PHYKPLQ8IUZ5 450 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF655Q8N720 491 aaPredicted RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 AKAP1Q92667 903 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 FUBP1Q96AE4 644 aaKnown RBP8.52□□□□□ -1.05
PCDH9-202ENST00000377865 PTERQ96BW5 349 aa8.52□□□□□ -1.05
PCDH9-202ENST00000377865 A0A1W2PRG6 482 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CLDN24A6NM45 220 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 WASH4PA8MWX3 477 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ELFN1P0C7U0 828 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HSD3B1P14060 373 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HSD3B2P26439 372 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PSMD8P48556 350 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 NCS1P62166 190 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ABRAXAS2Q15018 415 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 IDNKQ5T6J7 187 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 DHRS4L2Q6PKH6 230 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 LYSMD3Q7Z3D4 306 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 FAM20CQ8IXL6 584 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ANKRD49Q8WVL7 239 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 NSUN3Q9H649 340 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 AMBNQ9NP70 447 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ABCD2Q9UBJ2 740 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHGB5Q9Y5G0 923 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 FAM155AB1AL88 458 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 KIAA0513O60268 411 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 GPR32O75388 356 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 JRKO75564 520 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 FGF19O95750 216 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HLA-DPB1P04440 258 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 DCTP40126 519 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 LARS2Q15031 903 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HMBOX1Q6NT76 420 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SLC36A4Q6YBV0 504 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 GPRIN1Q7Z2K8 1008 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PTRH1Q86Y79 214 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SLC37A3Q8NCC5 494 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ZBED6CLQ96FA7 236 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 NARS2Q96I59 477 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 KPNA3O00505 521 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 COQ9O75208 318 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 DUSP11O75319 330 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CRISP3P54108 245 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CSTF1Q05048 431 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF33BQ06732 778 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RGS1Q08116 209 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SPCS2Q15005 226 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SLC43A3Q8NBI5 491 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ZFP90Q8TF47 636 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CCDC115Q96NT0 180 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PIP5K1AQ99755 562 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 MROQ9BYG7 248 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 BRINP2Q9C0B6 783 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 TBC1D17Q9HA65 648 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 TMEM138Q9NPI0 162 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 DCAF13Q9NV06 445 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 P2RX2Q9UBL9 471 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHGB6Q9Y5F9 930 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 HMX2A2RU54 273 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 URADA6NGE7 173 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 BCKDHAP12694 445 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 KDELR2P33947 212 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 RFX3P48380 749 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 BTBD16Q32M84 506 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 FNDC3BQ53EP0 1204 aaKnown RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ALFQ53S48 1182 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 OAFQ86UD1 273 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 TP53INP2Q8IXH6 220 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 BEND7Q8N7W2 519 aaPredicted RBP8.51□□□□□ -1.05
PCDH9-202ENST00000377865 SLC22A17Q8WUG5 538 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 ACDQ96AP0 544 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 CAPN10Q9HC96 672 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 GTF2A1LQ9UNN4 478 aa8.51□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHB11Q9Y5F2 797 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms