RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PDGFRLQ15198 375 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ASPGQ86U10 573 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 FIBINQ8TAL6 211 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SLC7A6Q92536 515 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 HDHD2Q9H0R4 259 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GSRP00390 522 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TBPP20226 339 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 OR2B6P58173 313 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MLC1Q15049 377 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TIGD6Q17RP2 521 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DET1Q7L5Y6 550 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SPPL2CQ8IUH8 684 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MFSD3Q96ES6 412 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 RAB9BQ9NP90 201 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ARL5CA6NH57 179 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GPX3P22352 226 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 WDTC1Q8N5D0 677 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 IL4I1Q96RQ9 567 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NDC1Q9BTX1 674 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SEC14L3Q9UDX4 400 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 OAZ3Q9UMX2 235 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PDHXO00330 501 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 STARP49675 285 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KLHL17Q6TDP4 642 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SCP2D1Q9UJQ7 156 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NR2F1P10589 423 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TAGLN2P37802 199 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF169Q14929 603 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SUN5Q8TC36 379 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NXNL1Q96CM4 212 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 OGDHLQ9ULD0 1010 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CRATP43155 626 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 BMXP51813 675 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TLR1Q15399 786 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NRF1Q16656 503 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 EXOC3L2Q2M3D2 409 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NCBP2-AS2Q69YL0 99 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TMIGD1Q6UXZ0 262 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 QSOX2Q6ZRP7 698 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NPAS4Q8IUM7 802 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 INO80EQ8NBZ0 244 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DUSP26Q9BV47 211 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TCRBV7S2A1N4TA0A589 114 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 AGAP5A6NIR3 686 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 OR2T11Q8NH01 316 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SH3YL1Q96HL8 342 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 GLAP06280 429 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 LINC00032P0C843 101 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 PCED1BQ96HM7 432 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 COQ9O75208 318 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 GUSBP08236 651 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 CCL15Q16663 113 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SERINC5Q86VE9 423 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SMDT1Q9H4I9 107 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 REEP4Q9H6H4 257 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SDHAF3Q9NRP4 125 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 TSPAN6O43657 245 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 METTL18O95568 372 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 GGT1P19440 569 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SPAM1P38567 509 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 XKR6Q5GH73 641 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 LGR4Q9BXB1 951 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 DPAGT1Q9H3H5 408 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SC5DO75845 299 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 LPCAT3Q6P1A2 487 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF550Q7Z398 422 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 ARMC5Q96C12 935 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 LRRC72A6NJI9 287 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SEC24DO94855 1032 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 ALYREFQ86V81 257 aaKnown RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 LRRC28Q86X40 367 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 ASCC1Q8N9N2 400 aaKnown RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 OR4K2Q8NGD2 314 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 CTRCQ99895 268 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 ATP1B2P14415 290 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 CRHBPP24387 322 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 GLRBP48167 497 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 MSS51Q4VC12 460 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 TANKQ92844 425 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 HEPHQ9BQS7 1158 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 POTEKPQ9BYX7 375 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 A0A0G2JLW4 131 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 TMEM200CA6NKL6 621 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 PSIP1O75475 530 aaKnown RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 H1F0P07305 194 aaKnown RBP4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SMIM10L2AP0DMW4 78 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SMIM10L2BP0DMW5 78 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 PKLRP30613 574 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 CDK6Q00534 326 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 FXNQ16595 210 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 C3orf38Q5JPI3 329 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
PCDH9-201ENST00000377861 SYT17Q9BSW7 474 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms