RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 LINC00471Q8N535 108 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 RELTQ969Z4 430 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 MARCH7Q9H992 704 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 COQ9O75208 318 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 SERPINA3P01011 423 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 C8BP07358 591 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 AGXTP21549 392 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 ARRB1P49407 418 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 RPS13P62277 151 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 RHDQ02161 417 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 OC90Q02509 493 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 NPAS3Q8IXF0 933 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PEX13Q92968 403 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 CNDP2Q96KP4 475 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 MED28Q9H204 178 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 WRBO00258 174 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 GJB5O95377 273 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PREPP48147 710 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 SOX4Q06945 474 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 RASGEF1BQ0VAM2 473 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 NFATC2Q13469 925 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF678Q5SXM1 525 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 SLC2A13Q96QE2 648 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 Q9N2J8 555 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF221Q9UK13 617 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 FABP12A6NFH5 140 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 FAM72CH0Y354 149 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 CD36P16671 472 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PPP1R8Q12972 351 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PUM1Q14671 1186 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 NPTX1Q15818 432 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF630Q2M218 657 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 RBM48Q5RL73 367 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 FAM72AQ5TYM5 149 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 TMEM164Q5U3C3 297 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 FAM72DQ6L9T8 149 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 FAM72BQ86X60 149 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 HIST1H2AAQ96QV6 131 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 NDC1Q9BTX1 674 aa17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 YTHDF1Q9BYJ9 559 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-204ENST00000377656 PDCD5O14737 125 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 MTRF1O75570 445 aaKnown RBP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 GKP32189 559 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 GBX2P52951 348 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 DNAJB13P59910 316 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 PCBP2Q15366 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 USP43Q70EL4 1123 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 CLIP4Q8N3C7 705 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 IMP4Q96G21 291 aaKnown RBP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZFP3Q96NJ6 502 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 KCNA7Q96RP8 456 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 MGME1Q9BQP7 344 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 A0A0X1KG70 313 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 TLR4O00206 839 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 LDB2O43679 373 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 ITPRIPL2Q3MIP1 535 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 RPS27LQ71UM5 84 aaKnown RBP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 ZNF554Q86TJ5 538 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 KLHL36Q8N4N3 616 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 GRHL3Q8TE85 626 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 TBX5Q99593 518 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 GPR62Q9BZJ7 368 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 TRNAU1APQ9NX07 287 aaKnown RBP17.27■□□□□ 0.36
CNTNAP3-204ENST00000377656 EDNRBP24530 442 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 PITX1P78337 314 aaPredicted RBP17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 TXNL4AP83876 142 aaKnown RBP17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 MC1RQ01726 317 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 GFOD2Q3B7J2 385 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 GALNTL5Q7Z4T8 443 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 PLA2G15Q8NCC3 412 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 OR5T3Q8NGG3 340 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 OR56A1Q8NGH5 318 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 KCNC2Q96PR1 638 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 MAGEE1Q9HCI5 957 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 BHMG1C9JSJ3 638 aaPredicted RBP17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 CREG1O75629 220 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 RCBTB2O95199 551 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 STATHP02808 62 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 ADAM8P78325 824 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 KCNC3Q14003 757 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 PUS10Q3MIT2 529 aaKnown RBP17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 MAMDC4Q6UXC1 1216 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 ZNF676Q8N7Q3 588 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 SLC2A4RGQ9NR83 387 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 COMMD3Q9UBI1 195 aa17.27■□□□□ 0.35
CNTNAP3-204ENST00000377656 TACSTD2P09758 323 aa17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 ZNF3P17036 446 aa17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 FPR1P21462 350 aa17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 SLC29A4Q7RTT9 530 aa17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 ZNF598Q86UK7 904 aaKnown RBP17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 TMEM74Q96NL1 305 aa17.26■□□□□ 0.35
CNTNAP3-204ENST00000377656 DLGAP4Q9Y2H0 992 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms