RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PDGFRLQ15198 375 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 TMEM52BQ4KMG9 183 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 CATSPEREQ5SY80 951 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 OR9A1PQ8NGU1 263 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 MPP4Q96JB8 637 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 DUSP26Q9BV47 211 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 PTTG2Q9NZH5 202 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 THEGQ9P2T0 379 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 GPR34Q9UPC5 381 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 MGAT4DA6NG13 374 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 THRBP10828 461 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 LAMP1P11279 417 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 NPPBP16860 134 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 P2RY2P41231 377 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 IL12RB1P42701 662 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 PNLIPRP1P54315 467 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 SH3BGRP55822 239 aaPredicted RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 C21orf58P58505 322 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 RAE1P78406 368 aaKnown RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 ADARB1P78563 741 aaKnown RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 PLCL1Q15111 1095 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 HKDC1Q2TB90 917 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 PPP2R2DQ66LE6 453 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 ZCCHC8Q6NZY4 707 aaKnown RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 BORAQ6PGQ7 559 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 ADHFE1Q8IWW8 467 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 CLECL1Q8IZS7 167 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 SH3KBP1Q96B97 665 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 LINC00615Q96LM1 132 aaPredicted RBP19.51■□□□□ 0.71
VSX1-202ENST00000376709 ITM2CQ9NQX7 267 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 GDE1Q9NZC3 331 aa19.51■□□□□ 0.71
VSX1-202ENST00000376709 C17orf113A0A1B0GUU1 675 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 H3BSA7 217 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 RFXAPO00287 272 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 VEGFDO43915 354 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 SCN2BO60939 215 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 CCNDBP1O95273 360 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 HPRP00739 348 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 SLBPQ14493 270 aaKnown RBP eCLIP19.5■□□□□ 0.71
VSX1-202ENST00000376709 LRRC23Q53EV4 343 aaPredicted RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 CPTPQ5TA50 214 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 VITQ6UXI7 678 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 USP51Q70EK9 711 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 FKBP9P1Q75LS8 142 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 ZNF551Q7Z340 670 aaPredicted RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 SVOPLQ8N434 492 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 LMNTD1Q8N9Z9 388 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 OR2L2Q8NH16 312 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 SNX19Q92543 992 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 TMIGD2Q96BF3 282 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 PYURFQ96I23 114 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 HIC2Q96JB3 615 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 DPEP2Q9H4A9 486 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 AASDHPPTQ9NRN7 309 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 TUBA8Q9NY65 449 aaPredicted RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 SH2B3Q9UQQ2 575 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 COL4A3Q01955 1670 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 E2F6O75461 281 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 BMP10O95393 424 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 ZNF682O95780 498 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 HOXB6P17509 224 aaKnown RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 EFNA1P20827 205 aaPredicted RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 HPCAL1P37235 193 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 CNTN1Q12860 1018 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 E2F2Q14209 437 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 PAGE2BQ5JRK9 111 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 SPESP1Q6UW49 350 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 B3GNT6Q6ZMB0 384 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 CACUL1Q86Y37 369 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 EID3Q8N140 333 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 ZCCHC7Q8N3Z6 543 aaKnown RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 VPS37AQ8NEZ2 397 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 OR10Q1Q8NGQ4 319 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 CHTF18Q8WVB6 975 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 EFCAB11Q9BUY7 163 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 DZANK1Q9NVP4 752 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 SAMD4AQ9UPU9 718 aaKnown RBP19.5■□□□□ 0.71
VSX1-202ENST00000376709 TMEM98Q9Y2Y6 226 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 PRKAB1Q9Y478 270 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 CEPT1Q9Y6K0 416 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 DENND4AQ7Z401 1863 aa19.5■□□□□ 0.71
VSX1-202ENST00000376709 GABRR3A8MPY1 467 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 LINC01565O15544 149 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 PCDH7O60245 1069 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 C1QCP02747 245 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 IL1RNP18510 177 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 TIA1P31483 386 aaKnown RBP eCLIP19.49■□□□□ 0.71
VSX1-202ENST00000376709 ALDH3B2P48448 385 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 CPA6Q8N4T0 437 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 PLA2G15Q8NCC3 412 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 PNPT1Q8TCS8 783 aaKnown RBP19.49■□□□□ 0.71
VSX1-202ENST00000376709 SGPP1Q9BX95 441 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 TRPV4Q9HBA0 871 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 PRSS16Q9NQE7 514 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 CCDC177Q9NQR7 707 aaPredicted RBP19.49■□□□□ 0.71
VSX1-202ENST00000376709 MAPRE3Q9UPY8 281 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 ASF1AQ9Y294 204 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 BTBD3Q9Y2F9 522 aa19.49■□□□□ 0.71
VSX1-202ENST00000376709 C1GALT1C1LP0DN25 315 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms