RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 LRRTM2O43300 516 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 JRKO75564 520 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 NSA2O95478 260 aaKnown RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 CLDN1O95832 211 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 C8GP07360 202 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 STSP08842 583 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 IL10P22301 178 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 AGTR2P50052 363 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 EEF1A2Q05639 463 aaKnown RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 RBPJQ06330 500 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 NAA30Q147X3 362 aaPredicted RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 TRIP13Q15645 432 aaPredicted RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 HKDC1Q2TB90 917 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 HIST2H2BCQ6DN03 193 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 UBE2R2Q712K3 238 aaPredicted RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 TBC1D19Q8N5T2 526 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 AMER3Q8N944 861 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 CAMKVQ8NCB2 501 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 CCDC138Q96M89 665 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 SERPINB12Q96P63 405 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 NAT9Q9BTE0 207 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 C20orf96Q9NUD7 363 aaPredicted RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 TRMT6Q9UJA5 497 aaKnown RBP14□□□□□ -0.17
HDAC6-204ENST00000376643 JRKLQ9Y4A0 524 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 MAD1L1Q9Y6D9 718 aa14□□□□□ -0.17
HDAC6-204ENST00000376643 CNTRLQ7Z7A1 2325 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 A0A0A6YYC8 382 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 IGKV1-8A0A0C4DH67 115 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 TCRBV7S3A2A0A539 114 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 KRT87PA6NCN2 255 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 I3L1I5 382 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 CDK2AP1O14519 115 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 SLC16A5O15375 505 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 AVILO75366 819 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 KLHL18O94889 574 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 RASAL1O95294 804 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 MED26O95402 600 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 TTC4O95801 387 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 HIST1H2AGP0C0S8 130 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 HIST1H2ADP20671 130 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 CXCR5P32302 372 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 CASP6P55212 293 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 TMEM205Q6UW68 189 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 CAND1Q86VP6 1230 aaKnown RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 MYO1HQ8N1T3 1032 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 GPATCH11Q8N954 259 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 NR4A3Q92570 626 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 HIST1H2AHQ96KK5 128 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 GPR21Q99679 349 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 HIST1H2AJQ99878 128 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 H2AFJQ9BTM1 129 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 ANKHQ9HCJ1 492 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 FBXO6Q9NRD1 293 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-204ENST00000376643 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 FBXO5Q9UKT4 447 aa13.99□□□□□ -0.17
HDAC6-204ENST00000376643 ZCWPW2A0A1B0GU75 182 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 OR5H15A6NDH6 313 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 H7BY64 318 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PGRMC1O00264 195 aaKnown RBP13.98□□□□□ -0.17
HDAC6-204ENST00000376643 HAT1O14929 419 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 HNRNPRO43390 633 aaKnown RBP13.98□□□□□ -0.17
HDAC6-204ENST00000376643 NRP2O60462 931 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 SLC35G6P0C7Q6 338 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 SLC1A2P43004 574 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 FNTAP49354 379 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 CTBP1Q13363 440 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 CUL1Q13616 776 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 EXT1Q16394 746 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 MFSD4BQ5TF39 518 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 CCDC137Q6PK04 289 aaKnown RBP13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PCGF5Q86SE9 256 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 LAPTM4BQ86VI4 370 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 C17orf64Q86WR6 236 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 TMEM151BQ8IW70 566 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 DENND6AQ8IWF6 608 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 ZC3H7AQ8IWR0 971 aaKnown RBP13.98□□□□□ -0.17
HDAC6-204ENST00000376643 LRRC8AQ8IWT6 810 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PPIL6Q8IXY8 311 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 RASGEF1CQ8N431 466 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 DTWD1Q8N5C7 304 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 SIRT6Q8N6T7 355 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PPFIBP2Q8ND30 876 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 CD200R1Q8TD46 325 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PSMF1Q92530 271 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 ZNF354BQ96LW1 612 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 PRAP1Q96NZ9 151 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 HAUS8Q9BT25 410 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 TRIM54Q9BYV2 358 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 ABCF3Q9NUQ8 709 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 ENTPD4Q9Y227 616 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 DOCK10Q96BY6 2186 aa13.98□□□□□ -0.17
HDAC6-204ENST00000376643 FOXS1O43638 330 aa13.97□□□□□ -0.17
HDAC6-204ENST00000376643 PRAMEF2O60811 474 aa13.97□□□□□ -0.17
HDAC6-204ENST00000376643 PGAM1P18669 254 aa13.97□□□□□ -0.17
HDAC6-204ENST00000376643 IMPA1P29218 277 aa13.97□□□□□ -0.17
HDAC6-204ENST00000376643 COILP38432 576 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-204ENST00000376643 MAGEA3P43357 314 aa13.97□□□□□ -0.17
HDAC6-204ENST00000376643 TERF1P54274 439 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms