RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PCDHGA6Q9Y5G7 932 aa20.05■□□□□ 0.8
MAP1LC3A-202ENST00000374837 ASH1LQ9NR48 2969 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 HYKKA2RU49 373 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 C21orf140B9A014 251 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NKX2-8O15522 239 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 LCMT2O60294 686 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SNRNP200O75643 2136 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 WDR47O94967 919 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SHBGP04278 402 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CAPN1P07384 714 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 AGXTP21549 392 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CCR8P51685 355 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 DCDP81605 110 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 FAM214AQ32MH5 1076 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CATSPEREQ5SY80 951 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 TIFABQ6ZNK6 161 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CSNK1A1LQ8N752 337 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RHEBL1Q8TAI7 183 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 TSNARE1Q96NA8 513 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 DPH2Q9BQC3 489 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 GPR87Q9BY21 358 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 ZNF358Q9NW07 568 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NUDT4Q9NZJ9 180 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 KCND3Q9UK17 655 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 FARSAQ9Y285 508 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 KCNE2Q9Y6J6 123 aa20.04■□□□□ 0.8
MAP1LC3A-202ENST00000374837 KCNE1BA0A087WTH5 132 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 FEZF1A0PJY2 475 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CCDC189A1A4V9 331 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 ZNF891A8MT65 544 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SUPT3HB4E1H0 165 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 UBXN8O00124 270 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SUPT3HO75486 399 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RFPL1O75677 317 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 MED26O95402 600 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 S100BP04271 92 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 MTHFD2P13995 350 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 HSPA7P48741 367 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RPS15AP62244 130 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CYP4F2P78329 520 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 MEF2AQ02078 507 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 KLC3Q6P597 504 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NXPE4Q6UWF7 544 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 FAM198BQ6UWH4 519 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 VN1R4Q7Z5H5 301 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 STARD8Q92502 1023 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RERGQ96A58 199 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 MTBPQ96DY7 904 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 THAP11Q96EK4 314 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 PARD6BQ9BYG5 372 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 CNOT10Q9H9A5 744 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 PSMC3IPQ9P2W1 217 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NDOR1Q9UHB4 597 aa20.03■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SPTBP11277 2137 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 IQANK1A0A1B0GTG1 560 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 A0A1B0GX78 115 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 MAP2K7O14733 419 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 DSCR3O14972 297 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 STK16O75716 305 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 IPO13O94829 963 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RAB40ALP0C0E4 278 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 ATXN8OSP0DMR3 200 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 ITGAXP20702 1163 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 PTPN4P29074 926 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 GRK3P35626 688 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 HSD17B3P37058 310 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 BCL6P41182 706 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RPS15P62841 145 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 HKDC1Q2TB90 917 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NKAIN1Q4KMZ8 207 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 DTWD1Q8N5C7 304 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 AENQ8WTP8 325 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 NLNQ9BYT8 704 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SPNS1Q9H2V7 528 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 PELI2Q9HAT8 420 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 DNAJC11Q9NVH1 559 aa20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 RUVBL1Q9Y265 456 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3A-202ENST00000374837 SYCE1LA8MT33 242 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 P2RX6O15547 441 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 STATHP02808 62 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 COL6A2P12110 1019 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 EMP3P54852 163 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 RPS18P62269 152 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 NFKB2Q00653 900 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 CDC16Q13042 620 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 MLIPQ5VWP3 458 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 C16orf46Q6P387 395 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 TMPRSS11BQ86T26 416 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 ENDOVQ8N8Q3 282 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 MFSD9Q8NBP5 474 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 ZNF740Q8NDX6 193 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 C10orf90Q96M02 699 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 SARGQ9BW04 601 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 CD244Q9BZW8 370 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 ACTL8Q9H568 366 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 SLC22A11Q9NSA0 550 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 TBK1Q9UHD2 729 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 ASB1Q9Y576 335 aa20.01■□□□□ 0.79
MAP1LC3A-202ENST00000374837 TRBC2A0A5B9 178 aa20■□□□□ 0.79
MAP1LC3A-202ENST00000374837 C9J4A7 227 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms