RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 GLT1D1Q96MS3 346 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 ZNF184Q99676 751 aaPredicted RBP4.71□□□□□ -1.66
USP48-202ENST00000374730 OMDQ99983 421 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 TMEM175Q9BSA9 504 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 TRMOQ9BU70 441 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 TTLL2Q9BWV7 592 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 SEZ6LQ9BYH1 1024 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 DPH1Q9BZG8 443 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 BTBD1Q9H0C5 482 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 PDFQ9HBH1 243 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 POPDC3Q9HBV1 291 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 TRPC7Q9HCX4 862 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 S100A14Q9HCY8 104 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 NT5MQ9NPB1 228 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 TLR8Q9NR97 1041 aaKnown RBP4.71□□□□□ -1.66
USP48-202ENST00000374730 MARCH5Q9NX47 278 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 ZDHHC7Q9NXF8 308 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 NCKIPSDQ9NZQ3 722 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 MPP6Q9NZW5 540 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 CPSF2Q9P2I0 782 aaKnown RBP4.71□□□□□ -1.66
USP48-202ENST00000374730 SLC2A6Q9UGQ3 507 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 CDH22Q9UJ99 828 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 VPS28Q9UK41 221 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 PRG3Q9Y2Y8 225 aaPredicted RBP4.71□□□□□ -1.66
USP48-202ENST00000374730 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 DENND4CQ5VZ89 1909 aa4.71□□□□□ -1.66
USP48-202ENST00000374730 COL4A6Q14031 1691 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 MTMR11A4FU01 709 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 RGSL1A5PLK6 1076 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 A8MT66 165 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 E9PBE3 544 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 H7C1Q1 480 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 H7C4K7 107 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 J3KR12 359 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SDHDO14521 159 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 CASQ2O14958 399 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 LDB2O43679 373 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 BUD23O43709 281 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 KLHL41O60662 606 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PRAMEF11O60813 436 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PQBP1O60828 265 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 CNTN5O94779 1100 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 VNN2O95498 520 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 NHLRC4P0CG21 123 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 HSPA1AP0DMV8 641 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 HSPA1BP0DMV9 641 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 TFEBP19484 476 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 NCF2P19878 526 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 OGNP20774 298 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 SAT1P21673 171 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SP100P23497 879 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 PSMA3P25788 255 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 YWHAQP27348 245 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PBX3P40426 434 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 CD86P42081 329 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SUOXP51687 545 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 AGFG1P52594 562 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 NAGLUP54802 743 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 RPL26P61254 145 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 CYP4F2P78329 520 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 SP3Q02447 781 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 TBL3Q12788 808 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 TAF10Q12962 218 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 CCNIQ14094 377 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 IHHQ14623 411 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 POLD3Q15054 466 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 TYSND1Q2T9J0 566 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 TBC1D25Q3MII6 688 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 MTX3Q5HYI7 312 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SIRPB2Q5JXA9 342 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 FAM171A1Q5VUB5 890 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 ZNF626Q68DY1 528 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 KLC3Q6P597 504 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 CNSTQ6PJW8 725 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 ZNF783Q6ZMS7 281 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 Q6ZWC4 215 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 LRRC8DQ7L1W4 858 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 TFAP2DQ7Z6R9 452 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 DHDDSQ86SQ9 333 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SNX32Q86XE0 403 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SLC22A9Q8IVM8 553 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 DEFB107AQ8IZN7 70 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PGAM4Q8N0Y7 254 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PELI3Q8N2H9 469 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PGBD5Q8N414 524 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 SLC25A41Q8N5S1 370 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 OR2C3Q8N628 320 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 GPATCH11Q8N954 259 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 DTX3LQ8TDB6 740 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 OVCA2Q8WZ82 227 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 IGSF8Q969P0 613 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 PSMG2Q969U7 264 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 NXNL1Q96CM4 212 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 R3HDM4Q96D70 268 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 L3HYPDHQ96EM0 354 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 UBXN10Q96LJ8 280 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 NR1H4Q96RI1 486 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 SERPINI1Q99574 410 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms