RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 KCNA7Q96RP8 456 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 EFCAB11Q9BUY7 163 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 SLC29A3Q9BZD2 475 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 EHD1Q9H4M9 534 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 PELI2Q9HAT8 420 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 MRPS30Q9NP92 439 aaKnown RBP16.84■□□□□ 0.29
PFDN6-201ENST00000374606 ZNF225Q9UK10 706 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 RNF11Q9Y3C5 154 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 TRAF6Q9Y4K3 522 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 U3KQA8 63 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 ZNF462Q96JM2 2506 aa16.84■□□□□ 0.29
PFDN6-201ENST00000374606 CPED1A4D0V7 1026 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 SLCO1B7G3V0H7 640 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 RRP8O43159 456 aaKnown RBP16.83■□□□□ 0.28
PFDN6-201ENST00000374606 TLX3O43711 291 aaPredicted RBP16.83■□□□□ 0.28
PFDN6-201ENST00000374606 PRAMEF4O60810 478 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 FKBP9O95302 570 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 TGDSO95455 350 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CAPN1P07384 714 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 FGF4P08620 206 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 C1GALT1C1LP0DN25 315 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 UROSP10746 265 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CDK4P11802 303 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CKMT1AP12532 417 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 DRD4P21917 467 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 VARSP26640 1264 aaKnown RBP16.83■□□□□ 0.28
PFDN6-201ENST00000374606 HNF4AP41235 474 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CCR8P51685 355 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 FOXA1P55317 472 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 GPLD1P80108 840 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 NAA25Q14CX7 972 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 PCM1Q15154 2024 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 TBCCQ15814 346 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 PAGE2BQ5JRK9 111 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 PRAMEF9Q5VWM5 478 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 GRHL2Q6ISB3 625 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 SPESP1Q6UW49 350 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 EFL1Q7Z2Z2 1120 aaKnown RBP16.83■□□□□ 0.28
PFDN6-201ENST00000374606 ADCK2Q7Z695 626 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 ZNF605Q86T29 641 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 TRIM73Q86UV7 250 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 HOMEZQ8IX15 550 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CLYBLQ8N0X4 340 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 L3MBTL4Q8NA19 623 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 FLVCR1-AS1Q8TAF5 88 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 METTL6Q8TCB7 284 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 WDR34Q96EX3 536 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 OR2A14Q96R47 310 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 TRIM55Q9BYV6 548 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 RABEP2Q9H5N1 569 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 NPHS2Q9NP85 383 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 SLC6A20Q9NP91 592 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 CUEDC1Q9NWM3 386 aaPredicted RBP16.83■□□□□ 0.28
PFDN6-201ENST00000374606 POMT2Q9UKY4 750 aa16.83■□□□□ 0.28
PFDN6-201ENST00000374606 ARID1BQ8NFD5 2236 aaPredicted RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 IGHV1OR21-1A0A087WYE8 117 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 EME2A4GXA9 379 aaPredicted RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 WFS1O76024 890 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 HRH2P25021 359 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 CASP2P42575 452 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 OR1D5P58170 312 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 YBX1P67809 324 aaKnown RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 E2F2Q14209 437 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 SLBPQ14493 270 aaKnown RBP eCLIP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 PDCD2Q16342 344 aaPredicted RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 CPSF6Q16630 551 aaKnown RBP eCLIP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 SLC5A12Q1EHB4 618 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 CGB2Q6NT52 195 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 IRGCQ6NXR0 463 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 SPRED1Q7Z699 444 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 FAM20CQ8IXL6 584 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 Q8N9G6 341 aaPredicted RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 ABHD11Q8NFV4 315 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 THOC1Q96FV9 657 aaKnown RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 CNDP2Q96KP4 475 aaKnown RBP16.82■□□□□ 0.28
PFDN6-201ENST00000374606 AIF1LQ9BQI0 150 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 SIKE1Q9BRV8 207 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 VTI1BQ9UEU0 232 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 TIMM22Q9Y584 194 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 AK5Q9Y6K8 562 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 USH1CQ9Y6N9 552 aa16.82■□□□□ 0.28
PFDN6-201ENST00000374606 KCNE1BA0A087WTH5 132 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 A0A0J9YY10 115 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 FFAR3O14843 346 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 HDAC3O15379 428 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 GPR42O15529 346 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 SKAP2O75563 359 aaPredicted RBP16.81■□□□□ 0.28
PFDN6-201ENST00000374606 RFPL3O75679 317 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 LDOC1O95751 146 aaPredicted RBP16.81■□□□□ 0.28
PFDN6-201ENST00000374606 FAM107AO95990 144 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 KRT6AP02538 564 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 KRT6BP04259 564 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 CD22P20273 847 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 CXCR2P25025 360 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 KRT6CP48668 564 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 PPP1CAP62136 330 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 REEP5Q00765 189 aa16.81■□□□□ 0.28
PFDN6-201ENST00000374606 ZRSR2Q15696 482 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms