RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 VAMP1P23763 118 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 HTR7P34969 479 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CBLBQ13191 982 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 OLIG2Q13516 323 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 GPR68Q15743 365 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 MOV10Q9HCE1 1003 aaKnown RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CYTH4Q9UIA0 394 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 C2orf92A0A1B0GVN3 265 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 NSG1P42857 185 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 IRF9Q00978 393 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 HNRNPDQ14103 355 aaKnown RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 HEPACAMQ14CZ8 416 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 METTL27Q8N6F8 245 aaPredicted RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 YIPF7Q8N8F6 280 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 UCK2Q9BZX2 261 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 DENND2DQ9H6A0 471 aaPredicted RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 ADAP2Q9NPF8 381 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 COL6A2P12110 1019 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 NXPE1Q8N323 547 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 JAGN1Q8N5M9 183 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 POGLUT1Q8NBL1 392 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 OR4E2Q8NGC2 313 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 OR5J2Q8NH18 312 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 STOML3Q8TAV4 291 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 MAF1Q9H063 256 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 GSKIPQ9P0R6 139 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 HEBP2Q9Y5Z4 205 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 SRRM3A6NNA2 597 aaPredicted RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 WASH3PC4AMC7 463 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 ACOX3O15254 700 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 CCNOP22674 350 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 EIF5AP63241 154 aaKnown RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 CREB5Q02930 508 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 CHRNA6Q15825 494 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 C1orf94Q6P1W5 598 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 SIAH1Q8IUQ4 282 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 PHC2Q8IXK0 858 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 EDDM13A0A1B0GTR0 161 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 CCINQ13939 588 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 LRP8Q14114 963 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 TM9SF2Q99805 663 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 ENY2Q9NPA8 101 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 PCDHB11Q9Y5F2 797 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 A0A1B0GVT2 93 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 HNRNPH3P31942 346 aaKnown RBP13.94□□□□□ -0.18
TRAF1-201ENST00000373887 FITM2Q8N6M3 262 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF565Q8N9K5 539 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 THAP6Q8TBB0 222 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 S100PBPQ96BU1 408 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 IGSF21Q96ID5 467 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 FBXL18Q96ME1 805 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 IL4I1Q96RQ9 567 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
TRAF1-201ENST00000373887 CSTBP04080 98 aaKnown RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 RHOP08100 348 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 CXCR1P25024 350 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 CRB2Q5IJ48 1285 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 SIRPB2Q5JXA9 342 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF776Q68DI1 518 aaPredicted RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ARL9Q6T311 187 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 OR5T2Q8NGG2 359 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 IFNA7P01567 189 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ITGA5P08648 1049 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 IL1R2P27930 398 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 CD47Q08722 323 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 LPAL2Q16609 132 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 XKRXQ6PP77 449 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 OR10G2Q8NGC3 310 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 OR5K1Q8NHB7 308 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 JPH3Q8WXH2 748 aaPredicted RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 C7orf26Q96N11 449 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 NUDT15Q9NV35 164 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 NOP16Q9Y3C1 178 aaKnown RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 GALTP07902 379 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 SLC6A4P31645 630 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 PRKD1Q15139 912 aaPredicted RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 KHDC1Q4VXA5 237 aaKnown RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 I3L521 148 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 LDB2O43679 373 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 RFPL2O75678 378 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 TGFB1P01137 390 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 PFKMP08237 780 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 RPS14P62263 151 aaKnown RBP13.93□□□□□ -0.18
TRAF1-201ENST00000373887 TUBB3Q13509 450 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 ADGRE1Q14246 886 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 AADACL4Q5VUY2 407 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 TRIM74Q86UV6 250 aa13.93□□□□□ -0.18
TRAF1-201ENST00000373887 FSTL5Q8N475 847 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms