RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 CDKN3Q16667 212 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 PDE12Q6L8Q7 609 aaKnown RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 NOXRED1Q6NXP6 359 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 P3H2Q8IVL5 708 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 SLC22A15Q8IZD6 547 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 POC5Q8NA72 575 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 CSGALNACT1Q8TDX6 532 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 MYDGFQ969H8 173 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 C7orf34Q96L11 122 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 VPS51Q9UID3 782 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 MN1Q10571 1320 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 SCAMP3O14828 347 aaKnown RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 SNPHO15079 494 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 PRMT3O60678 531 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 CLDN7O95471 211 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TRBC1P01850 177 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 GGT2P36268 569 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 PXNP49023 591 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 WNT3P56703 355 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ZNF45Q02386 682 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 PRKCDQ05655 676 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 UGT8Q16880 541 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ZXDCQ2QGD7 858 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TPRG1LQ5T0D9 272 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ZNF621Q6ZSS3 439 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 AMER2Q8N7J2 671 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 OVCA2Q8WZ82 227 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 ARMC5Q96C12 935 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 C6orf62Q9GZU0 229 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-207ENST00000373573 FKBP14Q9NWM8 211 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 MARCH5Q9NX47 278 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 KLHL42Q9P2K6 505 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 KLHL3Q9UH77 587 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 PIKFYVEQ9Y2I7 2098 aa12.72□□□□□ -0.37
HDAC8-207ENST00000373573 DSCR3O14972 297 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 NBNO60934 754 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 DLGAP3O95886 979 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 VIPP01282 170 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 CDK1P06493 297 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 DBTP11182 482 aaKnown RBP12.71□□□□□ -0.37
HDAC8-207ENST00000373573 C21orf33P30042 268 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-207ENST00000373573 SPAM1P38567 509 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 SLC19A1P41440 591 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 SLC6A12P48065 614 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 RGS19P49795 217 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 SEPHS1P49903 392 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 RTP2Q5QGT7 225 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 DNAJC22Q8N4W6 341 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-207ENST00000373573 KBTBD8Q8NFY9 601 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 CHAC2Q8WUX2 184 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 PROX1Q92786 737 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 WBP2Q969T9 261 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 YIPF2Q9BWQ6 316 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 CDADC1Q9BWV3 514 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.37
HDAC8-207ENST00000373573 RBMX2Q9Y388 322 aaKnown RBP12.71□□□□□ -0.37
HDAC8-207ENST00000373573 PCDHB7Q9Y5E2 793 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 PCDHGB3Q9Y5G1 929 aa12.71□□□□□ -0.37
HDAC8-207ENST00000373573 CLCA1A8K7I4 914 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 EIF3FO00303 357 aaPredicted RBP12.71□□□□□ -0.38
HDAC8-207ENST00000373573 RPLP0P05388 317 aaKnown RBP12.71□□□□□ -0.38
HDAC8-207ENST00000373573 IRF1P10914 325 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 SPNP16150 400 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 S100A1P23297 94 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 HNF1BP35680 557 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.38
HDAC8-207ENST00000373573 KCNJ10P78508 379 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 FRG2Q64ET8 278 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 GPR153Q6NV75 609 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 UBE2R2Q712K3 238 aaPredicted RBP12.71□□□□□ -0.38
HDAC8-207ENST00000373573 SYT12Q8IV01 421 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.38
HDAC8-207ENST00000373573 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 GGHQ92820 318 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 TPD52L3Q96J77 140 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 KCNC2Q96PR1 638 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 FRG2BQ96QU4 278 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 RAD9AQ99638 391 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 CEP44Q9C0F1 390 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.38
HDAC8-207ENST00000373573 ABCG8Q9H221 673 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms