RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CNTN3Q9P232 1028 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 DLGAP1O14490 977 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC31A1O15431 190 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 VLDLRP98155 873 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 LSM12Q3MHD2 195 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 TICAM1Q8IUC6 712 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 REEP4Q9H6H4 257 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 SNX15Q9NRS6 342 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ENPP3O14638 875 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 UQCRC1P31930 480 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 CDH5P33151 784 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 TMBIM6P55061 237 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF730Q6ZMV8 503 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 APTXQ7Z2E3 356 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 FNDC8Q8TC99 324 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 HYLS1Q96M11 299 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 WACQ9BTA9 647 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 C14orf105Q9NVL8 296 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ATE1O95260 518 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 RNF4P78317 190 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 SKA3Q8IX90 412 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 BRSK1Q8TDC3 778 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ALPK1Q96QP1 1244 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 DPEP2Q9H4A9 486 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 GLOD4Q9HC38 313 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 ELOVL2Q9NXB9 296 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 GPRC5BQ9NZH0 403 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
RAPGEF1-202ENST00000372190 TRAFD1O14545 582 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC22A3O75751 556 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLITRK5O94991 958 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 UCHL1P09936 223 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 GNB3P16520 340 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 PRDX6P30041 224 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CDH15P55291 814 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 PRKD1Q15139 912 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TEAD2Q15562 447 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF404Q494X3 552 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 C3orf33Q6P1S2 294 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 AP2M1Q96CW1 435 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ITPAQ9BY32 194 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 POLR2J2Q9GZM3 115 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TGIF2Q9GZN2 237 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CD84Q9UIB8 345 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CYP8B1Q9UNU6 501 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 NID2Q14112 1375 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 DAOAP59103 153 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CLNKQ7Z7G1 428 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 RBM15BQ8NDT2 890 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR7D4Q8NG98 312 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TAAR8Q969N4 342 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 RPS10P5Q9NQ39 176 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 RGPD5Q99666 1765 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 KHNYNO15037 678 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC28A2O43868 658 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 BPGMP07738 259 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 HSD17B2P37059 387 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 NCEH1Q6PIU2 408 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TMEM139Q8IV31 216 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 LPGAT1Q92604 370 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 RPL10LQ96L21 214 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SECISBP2Q96T21 854 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 AGAP2Q99490 1192 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 GAL3ST1Q99999 423 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 BTRCQ9Y297 605 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SPAM1P38567 509 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TGFBIQ15582 683 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 UGT8Q16880 541 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 FAM198BQ6UWH4 519 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 KCTD9Q7L273 389 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC26A9Q7LBE3 791 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ARL11Q969Q4 196 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ACDQ96AP0 544 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 A0A1W2PRQ8 180 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 ZNF821O75541 412 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 CYB5AP00167 134 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TFEBP19484 476 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 SLC1A2P43004 574 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 TAS2R39P59534 338 aa13.69□□□□□ -0.22
RAPGEF1-202ENST00000372190 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms