RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CXCR1P25024 350 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 TIGD6Q17RP2 521 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SPANXN4Q5MJ08 99 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 Q6ZVL8 140 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RETREG1Q9H6L5 497 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 CHD2O14647 1828 aaKnown RBP19.09■□□□□ 0.65
LMO4-202ENST00000370544 A0A075B6Q4 140 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 MATN2O00339 956 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 PDCD5O14737 125 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 OR1I1O60431 355 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SNX4O95219 450 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 ZNF554Q86TJ5 538 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SLC9B2Q86UD5 537 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 KLHL36Q8N4N3 616 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SPHK2Q9NRA0 654 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RIMKLBQ9ULI2 386 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RHOP08100 348 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 ZNF3P17036 446 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RAB8AP61006 207 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 ITPRIPL2Q3MIP1 535 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SUSD1Q6UWL2 747 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 C15orf39Q6ZRI6 1047 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 OR56A1Q8NGH5 318 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 TPT1P8Q9HAU6 139 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RNF186Q9NXI6 227 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 COL2A1P02458 1487 aaPredicted RBP19.09■□□□□ 0.65
LMO4-202ENST00000370544 AGXTP21549 392 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 AGTR2P50052 363 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 ZNF805Q5CZA5 627 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 ADGRD2Q7Z7M1 963 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 GKN2Q86XP6 184 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 TXNDC5Q8NBS9 432 aaKnown RBP19.09■□□□□ 0.65
LMO4-202ENST00000370544 PYURFQ96I23 114 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 TMEM74Q96NL1 305 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 RAD9AQ99638 391 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 SNTG1Q9NSN8 517 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 TMLHEQ9NVH6 421 aa19.09■□□□□ 0.65
LMO4-202ENST00000370544 EFCAB9A8MZ26 197 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 CLDN25C9JDP6 229 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 RFPL1O75677 317 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 CCNKO75909 580 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 SERPINA3P01011 423 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 GBAP04062 536 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 CD2P06729 351 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 FGF3P11487 239 aaPredicted RBP19.08■□□□□ 0.65
LMO4-202ENST00000370544 LEPRP48357 1165 aaKnown RBP19.08■□□□□ 0.65
LMO4-202ENST00000370544 SLC29A4Q7RTT9 530 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 RASGRP3Q8IV61 690 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 PIK3R3Q92569 461 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 CPNE3O75131 537 aaKnown RBP19.08■□□□□ 0.65
LMO4-202ENST00000370544 ZNF865P0CJ78 1059 aaPredicted RBP19.08■□□□□ 0.65
LMO4-202ENST00000370544 CBX5P45973 191 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 APLP1P51693 650 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 SLC22A15Q8IZD6 547 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 PSKH2Q96QS6 385 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 NDC1Q9BTX1 674 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 AMBNQ9NP70 447 aa19.08■□□□□ 0.65
LMO4-202ENST00000370544 BHMG1C9JSJ3 638 aaPredicted RBP19.08■□□□□ 0.64
LMO4-202ENST00000370544 SLC10A3P09131 477 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 IDNKQ5T6J7 187 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.64
LMO4-202ENST00000370544 HSH2DQ96JZ2 352 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 MGME1Q9BQP7 344 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 ITGB1BP2Q9UKP3 347 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 PHF24Q9UPV7 400 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 IGKV6-21A0A0C4DH24 114 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 GSRP00390 522 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 GFOD2Q3B7J2 385 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 TRIM74Q86UV6 250 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 LMX1AQ8TE12 382 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 GIMAP2Q9UG22 337 aa19.08■□□□□ 0.64
LMO4-202ENST00000370544 SPIN1Q9Y657 262 aaPredicted RBP19.08■□□□□ 0.64
LMO4-202ENST00000370544 CREG1O75629 220 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 C6orf47O95873 294 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 ETV3P41162 512 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 ATP4BP51164 291 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 ABHD18Q0P651 414 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 PUM1Q14671 1186 aaKnown RBP eCLIP19.07■□□□□ 0.64
LMO4-202ENST00000370544 NPTX1Q15818 432 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 PAAF1Q9BRP4 392 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 PTTG2Q9NZH5 202 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 ZNF221Q9UK13 617 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 TOPAZ1Q8N9V7 1692 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 KDM3BQ7LBC6 1761 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 IGKV6D-21A0A0A0MT36 114 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 TYROBPO43914 113 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 RBMXL2O75526 392 aaKnown RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 ARCN1P48444 511 aaKnown RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 TICAM1Q8IUC6 712 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 ZSWIM3Q96MP5 696 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 TRNAU1APQ9NX07 287 aaKnown RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 BAZ2AQ9UIF9 1905 aaKnown RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 C9J4A7 227 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 M0QX08 132 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 STK19P49842 368 aaPredicted RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 ZNF630Q2M218 657 aaPredicted RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 ERN2Q76MJ5 926 aaKnown RBP19.07■□□□□ 0.64
LMO4-202ENST00000370544 PKP2Q99959 881 aa19.07■□□□□ 0.64
LMO4-202ENST00000370544 SERINC1Q9NRX5 453 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms