RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GPRC5BQ9NZH0 403 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 NDOR1Q9UHB4 597 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 ANGPTL3Q9Y5C1 460 aa14.19□□□□□ -0.14
COL9A1-204ENST00000370496 USP24Q9UPU5 2620 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 SPTBP11277 2137 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CCDC151A5D8V7 595 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 H3BMH7 237 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 K7EPI3 171 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CLGNO14967 610 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 GLRA3O75311 464 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 MTHFD2P13995 350 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 DLSTP36957 453 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 BCL6P41182 706 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 ARSFP54793 590 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 TMPRSS3P57727 454 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 REEP5Q00765 189 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 C1orf189Q5VU69 101 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 YOD1Q5VVQ6 348 aaPredicted RBP14.18□□□□□ -0.14
COL9A1-204ENST00000370496 RHBDD2Q6NTF9 364 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 NXPE4Q6UWF7 544 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 DSELQ8IZU8 1212 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 PTGR2Q8N8N7 351 aaPredicted RBP14.18□□□□□ -0.14
COL9A1-204ENST00000370496 SLC38A9Q8NBW4 561 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 PROKR1Q8TCW9 393 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 LRFN5Q96NI6 719 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 ZNF285Q96NJ3 590 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 OR2A5Q96R48 311 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CCNL2Q96S94 520 aaPredicted RBP14.18□□□□□ -0.14
COL9A1-204ENST00000370496 AIF1LQ9BQI0 150 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CAPS2Q9BXY5 557 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 LHX9Q9NQ69 397 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CUTCQ9NTM9 273 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 DHCR7Q9UBM7 475 aaKnown RBP14.18□□□□□ -0.14
COL9A1-204ENST00000370496 CROTQ9UKG9 612 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 PADI1Q9ULC6 663 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 ASB1Q9Y576 335 aa14.18□□□□□ -0.14
COL9A1-204ENST00000370496 A0A1B0GX78 115 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 A0A1W2PPM1 405 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 TRBC2A0A5B9 178 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 FOXO6A8MYZ6 492 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 C9J4A7 227 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 MEN1O00255 615 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 TXNDC9O14530 226 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 MAP2K7O14733 419 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 OR1F1O43749 312 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 STATHP02808 62 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 GSTA1P08263 222 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 SLC35G6P0C7Q6 338 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 LIFP15018 202 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 AGXTP21549 392 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 VARSP26640 1264 aaKnown RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 RORAP35398 523 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 SLBPQ14493 270 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 HKDC1Q2TB90 917 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 KRT71Q3SY84 523 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 FBXO42Q6P3S6 717 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 TTLL10Q6ZVT0 673 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 CYP4X1Q8N118 509 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 CT55Q8WUE5 264 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 THAP11Q96EK4 314 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 DPH2Q9BQC3 489 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 ROPN1BQ9BZX4 212 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 ROPN1Q9HAT0 212 aaPredicted RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 PRM3Q9NNZ6 103 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 LGALS13Q9UHV8 139 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 RUVBL1Q9Y265 456 aaKnown RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
COL9A1-204ENST00000370496 TNPO3Q9Y5L0 923 aaKnown RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 URB1O60287 2271 aaKnown RBP14.17□□□□□ -0.14
COL9A1-204ENST00000370496 ZFHX4Q86UP3 3567 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 LOC101059948A0A1B0GTJ6 334 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 HYKKA2RU49 373 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 FITM1A5D6W6 292 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 COPEO14579 308 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 DSCR3O14972 297 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 P2RX6O15547 441 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 NDUFS4O43181 175 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 KLK8O60259 260 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 SERPIND1P05546 499 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 EPB42P16452 691 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 KRT4P19013 534 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 TAC1P20366 129 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 ALAS2P22557 587 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 CXCR2P25025 360 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 EEF1DP29692 281 aaKnown RBP14.16□□□□□ -0.14
COL9A1-204ENST00000370496 SRSF6Q13247 344 aaKnown RBP14.16□□□□□ -0.14
COL9A1-204ENST00000370496 MUM1Q2TAK8 710 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 FAM214AQ32MH5 1076 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 XKR6Q5GH73 641 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 ATG9BQ674R7 924 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 CCDC81Q6ZN84 652 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 ASPGQ86U10 573 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 C4orf33Q8N1A6 199 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 METTL27Q8N6F8 245 aaPredicted RBP14.16□□□□□ -0.14
COL9A1-204ENST00000370496 MFSD9Q8NBP5 474 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 ZNF740Q8NDX6 193 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 OR4K1Q8NGD4 311 aa14.16□□□□□ -0.14
COL9A1-204ENST00000370496 HNRNPLLQ8WVV9 542 aaKnown RBP14.16□□□□□ -0.14
COL9A1-204ENST00000370496 PHF21BQ96EK2 531 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms