RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ADAMTS15Q8TE58 950 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 CHPT1Q8WUD6 406 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 RHBDF1Q96CC6 855 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 CSPG4P5Q96PW8 444 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 PSD2Q9BQI7 771 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.35□□□□□ -1.07
LCA5-201ENST00000369846 GBA3Q9H227 469 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 TMEM59LQ9UK28 342 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 RPS10-NUDT3A0A1W2PQS6 291 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 M6PRP20645 277 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 LPOP22079 712 aaPredicted RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 RPS10P46783 165 aaKnown RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 RAB8AP61006 207 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 POU6F2P78424 691 aaPredicted RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 HMGCS1Q01581 520 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 GAD2Q05329 585 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 BCL7AQ4VC05 210 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 UBXN11Q5T124 520 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 DCAF12L1Q5VU92 463 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 CES5AQ6NT32 575 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 ACER1Q8TDN7 264 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 HAS1Q92839 578 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 CLCC1Q96S66 551 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 SLC29A1Q99808 456 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 COMMD4Q9H0A8 199 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 OR10A4Q9H209 315 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 RETREG1Q9H6L5 497 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 ABCD2Q9UBJ2 740 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 CHD4Q14839 1912 aa8.35□□□□□ -1.07
LCA5-201ENST00000369846 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
LCA5-201ENST00000369846 GPR89AB7ZAQ6 455 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 J3QLW9 94 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SLC1A7O00341 560 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 E2F3O00716 465 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 LYRM1O43325 122 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 B4GAT1O43505 415 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 GATBO75879 557 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 GPR89BP0CG08 455 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 ZNF19P17023 458 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 PTPN3P26045 913 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 RPL10P27635 214 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 GSTM2P28161 218 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CLCN4P51793 760 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 GBX2P52951 348 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 PFKPQ01813 784 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CREB5Q02930 508 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SRSF11Q05519 484 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 MFSD10Q14728 455 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 TNFAIP8L2Q6P589 184 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 POMZP3Q6PJE2 187 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 ZNF574Q6ZN55 896 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 SPATC1Q76KD6 591 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 NATD1Q8N6N6 113 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 YIPF7Q8N8F6 280 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 C12orf29Q8N999 325 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 OR10H5Q8NGA6 315 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 OR8K5Q8NH50 307 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SPATA22Q8NHS9 363 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SLC25A36Q96CQ1 311 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 S100A16Q96FQ6 103 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 C2orf49Q9BVC5 232 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 NAA50Q9GZZ1 169 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 CCM2LQ9NUG4 571 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 TRPS1Q9UHF7 1281 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 NR2E3Q9Y5X4 410 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 IRS2Q9Y4H2 1338 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 TEX13DA0A0J9YY54 714 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 A0A1B0GVC2 190 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 A0A1W2PQ67 120 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CLIC1O00299 241 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SFTPBP07988 381 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CAPN3P20807 821 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 G0S2P27469 103 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SSTR4P31391 388 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 MC4RP32245 332 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CASP3P42574 277 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 ZNHIT3Q15649 155 aaPredicted RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 ABCA11PQ4W5N1 156 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 ZNF311Q5JNZ3 666 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 OR5B12Q96R08 314 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CCDC106Q9BWC9 280 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 TTLL2Q9BWV7 592 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 PLA2G12BQ9BX93 195 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 B3GNT5Q9BYG0 378 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
LCA5-201ENST00000369846 SGK2Q9HBY8 427 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 GLOD4Q9HC38 313 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 GPATCH2Q9NW75 528 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 TMEM45AQ9NWC5 275 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SCP2D1Q9UJQ7 156 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
LCA5-201ENST00000369846 A0A0G2JMP0 313 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms