RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SGPP1Q9BX95 441 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 CAAP1Q9H8G2 361 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 PPT2Q9UMR5 302 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 USP22Q9UPT9 525 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 FADS3Q9Y5Q0 445 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
USF1-202ENST00000368020 PCM1Q15154 2024 aa13.54□□□□□ -0.24
USF1-202ENST00000368020 MGAT4DA6NG13 374 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 DLGAP1O14490 977 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 FPGTO14772 594 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 SCAMP2O15127 329 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 BMP10O95393 424 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 CST1P01037 141 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ATP6V1B1P15313 513 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TACR1P25103 407 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PTPN6P29350 595 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PBLDP30039 288 aaPredicted RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 GDI1P31150 447 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 HSD17B2P37059 387 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ARSFP54793 590 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PHC1P78364 1004 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 DAG1Q14118 895 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 RFX4Q33E94 735 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ZCCHC7Q8N3Z6 543 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 OR7G3Q8NG95 312 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 MAGEE2Q8TD90 523 aaPredicted RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 AURKBQ96GD4 344 aaPredicted RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 OR4K3Q96R72 315 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 REXO4Q9GZR2 422 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PTTG2Q9NZH5 202 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 BTNL2Q9UIR0 455 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 RPS6KA6Q9UK32 745 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TBC1D3BA6NDS4 549 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TRIM64A6NGJ6 449 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 MAGEB17A8MXT2 336 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 G3V2T6 193 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 GNGT2O14610 69 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PI15O43692 258 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 GPX2P18283 190 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TTKP33981 857 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 SLC6A11P48066 632 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 GZMMP51124 257 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TBPL1P62380 186 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ESRRGP62508 458 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ITPRIPL2Q3MIP1 535 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TRMT11Q7Z4G4 463 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 R3HCC1LQ7Z5L2 792 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 LAS2Q8IYD9 372 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 CLEC4FQ8N1N0 589 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 FBXO30Q8TB52 745 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 ZNF480Q8WV37 535 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 CHTF18Q8WVB6 975 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TMBIM1Q969X1 311 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 TBC1D20Q96BZ9 403 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 MTERF1Q99551 399 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 RBM4BQ9BQ04 359 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 GRIP2Q9C0E4 1043 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 IKZF5Q9H5V7 419 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 CCDC177Q9NQR7 707 aaPredicted RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 THAP10Q9P2Z0 257 aaPredicted RBP13.53□□□□□ -0.24
USF1-202ENST00000368020 PCDHGB4Q9UN71 923 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 PCDHGB5Q9Y5G0 923 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 V9GYQ6 96 aa13.53□□□□□ -0.24
USF1-202ENST00000368020 OTOL1A6NHN0 477 aaPredicted RBP13.52□□□□□ -0.25
USF1-202ENST00000368020 TRIM64CA6NLI5 447 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 ALPLP05186 524 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
USF1-202ENST00000368020 C1GALT1C1LP0DN25 315 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 PCNAP12004 261 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 HLA-EP13747 358 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 PDHA2P29803 388 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 TIA1P31483 386 aaKnown RBP eCLIP13.52□□□□□ -0.25
USF1-202ENST00000368020 SOX11P35716 441 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 PIK3CBP42338 1070 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.25
USF1-202ENST00000368020 ARHGAP19Q14CB8 494 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 PON2Q15165 354 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 UGT8Q16880 541 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 CPTPQ5TA50 214 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 TTC23Q5W5X9 447 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 CPZQ66K79 652 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 USP51Q70EK9 711 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 LPCAT2Q7L5N7 544 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms