RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 NOS1APO75052 506 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 GOLGA7Q7Z5G4 137 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 SMOQ99835 787 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 STRA6Q9BX79 667 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 HSD17B1P14061 328 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 C12orf66Q96MD2 445 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TPT1P8Q9HAU6 139 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 LYARQ9NX58 379 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 PCDHGB5Q9Y5G0 923 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TCF7L1Q9HCS4 588 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CAPN14A8MX76 684 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TMEM150CB9EJG8 249 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 PCCBP05166 539 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CFL1P23528 166 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TECRLQ5HYJ1 363 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CLIP3Q96DZ5 547 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TAPBPLQ9BX59 468 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 PCDHB11Q9Y5F2 797 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLC2A2P11168 524 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 DSC3Q14574 896 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TMIGD1Q6UXZ0 262 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 BIRC7Q96CA5 298 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 PGAP3Q96FM1 320 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 STRCQ7RTU9 1775 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 CCL22O00626 93 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TSPAN9O75954 239 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 TMEM17Q86X19 198 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR2AG1Q9H205 316 aa11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 NKX1-2Q9UD57 310 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-203ENST00000366766 A0A1W2PRG6 482 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CCL16O15467 120 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CYB5AP00167 134 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 DNASE1L1P49184 302 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 NIPAL4Q0D2K0 466 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 DNAJA4Q8WW22 397 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 HSH2DQ96JZ2 352 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CD180Q99467 661 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ADH1BP00325 375 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 TFPIP10646 304 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 GPER1Q99527 375 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ELAC1Q9H777 363 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CABIN1Q9Y6J0 2220 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 IGKV6-21A0A0C4DH24 114 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 YES1P07947 543 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ADH5P11766 374 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 SYT16Q17RD7 645 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF433Q8N7K0 673 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ANKFN1Q8N957 763 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 EPCAMP16422 314 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 GRIA1P42261 906 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 RUNDC3AQ59EK9 446 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CIR1Q86X95 450 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR13C4Q8NGS5 318 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 C5orf34Q96MH7 638 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 AOC2O75106 756 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 MT-ND1P03886 318 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 NRG3P56975 720 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 C22orf39Q6P5X5 142 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF367Q7RTV3 350 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 PKP2Q99959 881 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 THOC6Q86W42 341 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 PNLDC1Q8NA58 520 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 HTRA2O43464 458 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 NFATC2Q13469 925 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 TOMM20Q15388 145 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZNF181Q2M3W8 571 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 ZFAND4Q86XD8 727 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 L3HYPDHQ96EM0 354 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 FBXW2Q9UKT8 454 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 MOB2Q70IA6 237 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 GPR151Q8TDV0 419 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 IFT52Q9Y366 437 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
CDC42BPA-203ENST00000366766 IGKV6D-21A0A0A0MT36 114 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 PRKD3O94806 890 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 HAPLN1P10915 354 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 CHRNA4P43681 627 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 SWI5Q1ZZU3 235 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 AGTRAPQ6RW13 159 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 UNC5DQ6UXZ4 953 aa11.68□□□□□ -0.54
CDC42BPA-203ENST00000366766 OR4F6Q8NGB9 312 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms