RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 LSMEM2Q8N112 164 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 KRT78Q8N1N4 520 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 C2orf73Q8N5S3 287 aaPredicted RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 DCBLD1Q8N8Z6 715 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR2L3Q8NG85 312 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR4F6Q8NGB9 312 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 NEIL2Q969S2 332 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 UBE2E3Q969T4 207 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCDC74AQ96AQ1 378 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 REPS1Q96D71 796 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 MOCOSQ96EN8 888 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PTCD3Q96EY7 689 aaKnown RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 AHCYL2Q96HN2 611 aaKnown RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 APOLD1Q96LR9 279 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 CDK15Q96Q40 435 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR4K3Q96R72 315 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 EFCAB11Q9BUY7 163 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 NTMT1Q9BV86 223 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 TBC1D10AQ9BXI6 508 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC29A3Q9BZD2 475 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 SHCBP1LQ9BZQ2 653 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 C20orf27Q9GZN8 174 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 EHD1Q9H4M9 534 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 ZNF395Q9H8N7 513 aaPredicted RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PELI2Q9HAT8 420 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRM3Q9NNZ6 103 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 NPHS2Q9NP85 383 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 MRPS30Q9NP92 439 aaKnown RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PFDN4Q9NQP4 134 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 INTS7Q9NVH2 962 aaKnown RBP6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 KCNK4Q9NYG8 393 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PSD3Q9NYI0 1048 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 ACTR10Q9NZ32 417 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 LRIT1Q9P2V4 623 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 VTI1BQ9UEU0 232 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 PADI4Q9UM07 663 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 FIS1Q9Y3D6 152 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 RNF215Q9Y6U7 377 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 U3KQA8 63 aa6.52□□□□□ -1.37
RNU1-55P-201ENST00000365510 A0A0J9YY10 115 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CPED1A4D0V7 1026 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 TRPC5OSA6NMA1 111 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 TMEM233B4DJY2 109 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 BTN3A3O00478 584 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PPP6CO00743 305 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 HDAC3O15379 428 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 RRP8O43159 456 aaKnown RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 KLK10O43240 276 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 OR4F21O95013 312 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 FAM107AO95990 144 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 KRT6AP02538 564 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 KRT6BP04259 564 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CAPN1P07384 714 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 UGT2B7P16662 529 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 NPPBP16860 134 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 TYRP1P17643 537 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 EPORP19235 508 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 POLR2CP19387 275 aaPredicted RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 DRD4P21917 467 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 HRH2P25021 359 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CXCR2P25025 360 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRDX3P30048 256 aaKnown RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PEBP1P30086 187 aaKnown RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 GRK3P35626 688 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 HNF4AP41235 474 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 KRT6CP48668 564 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 DUSP3P51452 185 aaPredicted RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 ERVPABLB-1P60509 514 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SH3BP2P78314 561 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 REEP5Q00765 189 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PRDX1Q06830 199 aaKnown RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PCDH1Q08174 1060 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 IFT88Q13099 833 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 LAPTM5Q13571 262 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLBPQ14493 270 aaKnown RBP eCLIP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 PDCD2Q16342 344 aaPredicted RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 HIST2H2ACQ16777 129 aaPredicted RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLC5A12Q1EHB4 618 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 GKAP1Q5VSY0 366 aaPredicted RBP6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 LIPJQ5W064 366 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CLEC6AQ6EIG7 209 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 HIST2H2AA3Q6FI13 130 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 IRGCQ6NXR0 463 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPESP1Q6UW49 350 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 NXPE4Q6UWF7 544 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SLCO4C1Q6ZQN7 724 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 SPATA21Q7Z572 469 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CLYBLQ8N0X4 340 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 TBC1D19Q8N5T2 526 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CDYL2Q8N8U2 506 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 EXD3Q8N9H8 876 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 LMNTD1Q8N9Z9 388 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 L3MBTL4Q8NA19 623 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 ABHD11Q8NFV4 315 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 METTL6Q8TCB7 284 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 TWIST2Q8WVJ9 160 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 CCT6BQ92526 530 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 RSC1A1Q92681 617 aa6.51□□□□□ -1.37
RNU1-55P-201ENST00000365510 NXPE2Q96DL1 559 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms