RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 KDELR2P33947 212 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 KIR3DL1P43629 444 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 WNT3P56703 355 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 TSTA3Q13630 321 aaPredicted RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 DGKKQ5KSL6 1271 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMC3-201ENST00000361804 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 STEAP3Q658P3 488 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 CAPN13Q6MZZ7 669 aaPredicted RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 NOXRED1Q6NXP6 359 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SYT12Q8IV01 421 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 FBLIM1Q8WUP2 373 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 NTMT1Q9BV86 223 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 WDR12Q9GZL7 423 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 RUBCNLQ9H714 662 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SLC22A1O15245 554 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 ERN1O75460 977 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 ZNF821O75541 412 aaPredicted RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 DLGAP3O95886 979 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 TRBC1P01850 177 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 KRT6AP02538 564 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 KRT6BP04259 564 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 STSP08842 583 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 ITGAMP11215 1152 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 COX7A2P14406 83 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 KRT6CP48668 564 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 ALDH7A1P49419 539 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 GAB1Q13480 694 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 TAF12Q16514 161 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 VMACQ2NL98 169 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 IER5LQ5T953 404 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 MFSD14CQ5VZR4 134 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 TSEN54Q7Z6J9 526 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 AADATQ8N5Z0 425 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 POC5Q8NA72 575 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SCAMP4Q969E2 229 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SH3GL1Q99961 368 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 SCN3BQ9NY72 215 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 RHCGQ9UBD6 479 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 NDRG4Q9ULP0 352 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 FAM32AQ9Y421 112 aaKnown RBP10.24□□□□□ -0.77
SMC3-201ENST00000361804 PCDHGA6Q9Y5G7 932 aa10.24□□□□□ -0.77
SMC3-201ENST00000361804 LINC00854A0A1B0GVQ3 168 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 PSMD11O00231 422 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 ANXA5P08758 320 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 LHCGRP22888 699 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 MAGEA2P43356 314 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 BCL2L1Q07817 233 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 ABHD18Q0P651 414 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 NPRL3Q12980 569 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CHIT1Q13231 466 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 COL9A2Q14055 689 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 HKDC1Q2TB90 917 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 COX20Q5RI15 118 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 SYT6Q5T7P8 510 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■■□□ 17.1
SMC3-201ENST00000361804 NXPE1Q8N323 547 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 GLB1L3Q8NCI6 653 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 SPATA17Q96L03 361 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CENPOQ9BU64 300 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 TTLL2Q9BWV7 592 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 TRPS1Q9UHF7 1281 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 TMPRSS11EQ9UL52 423 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 TPRKBQ9Y3C4 175 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 SNX8Q9Y5X2 465 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 FREM2Q5SZK8 3169 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR2A25A4D2G3 310 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR2AG2A6NM03 316 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 PCDH7O60245 1069 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 GALTP07902 379 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CD70P32970 193 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 MAD2L1Q13257 205 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 TOP3AQ13472 1001 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR4K1Q8NGD4 311 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 SPPL2AQ8TCT8 520 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 UTP15Q8TED0 518 aaKnown RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 VMP1Q96GC9 406 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 FEVQ99581 238 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 NIPSNAP1Q9BPW8 284 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CHCHD6Q9BRQ6 235 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 COPS4Q9BT78 406 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 SLC32A1Q9H598 525 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 KCNE1BA0A087WTH5 132 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 WNT9AO14904 365 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CCNDBP1O95273 360 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 AMD1P17707 334 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 AOAHP28039 575 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 TGM4P49221 684 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CDKN3Q16667 212 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 KIAA1614Q5VZ46 1190 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 CRTC1Q6UUV9 634 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 FAM124AQ86V42 546 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 HEATR4Q86WZ0 1026 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 FAM217AQ8IXS0 508 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR5AK3PQ8NH89 298 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 ALG14Q96F25 216 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 MED8Q96G25 268 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms